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scnpilot_p_inoc_scaffold_80_540

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 548146..553581

Top 3 Functional Annotations

Value Algorithm Source
Putative autotransporter protein (Fragment) n=1 Tax=Novosphingobium sp. AP12 RepID=J2H7Y4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 999.99
  • Bit_score: 748
  • Evalue 1.90e-212
Putative autotransporter protein {ECO:0000313|EMBL:EJL31523.1}; Flags: Precursor; Fragment;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 34.0
  • Coverage: 999.99
  • Bit_score: 748
  • Evalue 2.70e-212
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 999.99
  • Bit_score: 503
  • Evalue 2.40e-139

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 5436
GTGATCCAGAACAGTAATGGCCGTCGCTCGTATCGAGCGGCGCTTTTCGTCGCGCGTATCAGCCTTGCCGCTCTGGCCGTGGGCGCCCCGGTTCGGGCGTGGGCGGAATGTTCGCCCAGTCCGAACCCGCAGCTCACGGATATCACCTGCACCGGCACCACCACCAATGGCGTAACCCTCACCGCCTACTATGCCCCGCTGACCGTGGTCAGCGATGCCACGGTGACGAATACGGGCGCCTCGGCCATTACCGTGGCGATCCCGTCGCCCAATGGGTACTATTCACGCAATGCCGTCATTACCGTGAACGGCATCGTGACCGCCTATGGCGCGCCGGGCATCACCGTGAGCTCGGGCACGACCTTGGTCAGCACCTACGATTTCAGCGGCACCTATGCCTCGATCAGCGTCGCCCCGACAGGCATCGTTTCGGGCACCACCGGCATTGCCCTGACGCAGAGCCCCGGACCCTATTCGATCTATTCCCCCACCAGAGTAATGGTTTACAACGAAGGGACGATCAGCGGCACGAGCGGCGTGGCCATTTCCACCAGCGGCAATTATGCGAGGCTGGATTCAATCATCAACACCGGCACCGGGACGATCGGCGCCATTGCGGCCCGTTTCGGCCAGATCCATAACAGCGGCACAATCGAAGGCGGCAGCCTCTCCGCGATCAGCCAGGGCAACGTCGACAGCAATTATCTGATCTCCAATAATTCCATCATCCATTCCGCCAGCAACGCCGCCACGATCAGCATCGCCTCTGCGCAGTCCGCCTCTTTGAGCAACACGATCATCAATTCGCACGTGATCGCCAATGACGGCGCGGGCGGCGCGATTTACTCCGGCAACTATCTGACCATCGAAAACGATGCCGGCGCAACCATCGCCAGCAAGGGCGCGGCCACCATTGCCAACGGCTCCTCCCTGGCGTTGAACAACCTGGGGCTCATCACCAATACCGGCGGCGGAATGGGCATCATCGGCTCCAATGTGTCGATCAACAATTATTTCCTGGGCACCATCAATGCTTTGCCCGGTGCCGATGCGATCTCGGTCTCGGGCAAATTGACGCTGTTGAACACCGGCACGATCAACGGCAATATCGTGACCACATTGGGCATGGACGGCGCGATGCTGGACTCCTCGGCCGGCACGATCAACGGCAATGTCCTATTGGGCCCCGCGGACGATACGGTAGTCGCCAATTACGTGAATGGCGCATTGGTGACCGGGATCAACGGCACGCTGGACGGCGGCGGCGGCACGAATTTGCTGCAGATTAATTTCCTGAAAAATGCCGAACTGTCGAATGCTCTGACGCTGCCCACGAATTTTTTCGTGATGAATGCCAATGTGGCTTCGGGCGCAACGGTCACCCTGGGGCAGGGCTTTACCGCCTATAATGGTCTGGGCATCAATGGCGCGGGTTCGCTGGTGAACAAGACAACGCTGTTCGGCACGATCCAGATCGGCGCGCAGGGCTCCAGCCTGGCCTCTTTCGTCAACGATGGCACGATCATAGCCAACGGCACCGGCGTCTATGACCAGAACGGCAAGAGCCTGAGCAACACCGGCGCGATCCTCTCGCTGGGCGGAACGGGGCTGGTGCTGACCGAAACCAACGGCACCCCCAATACCAACAACACCAACAGCGGCGCCATCACCGGCTCCACGGTCGGGGCCAGTCTCTTTGCCTCTTCGCTGGTCAACACCGGGACGATCAGCGGCGCGACCGGTGTGCTGCTCGATATGAATTCGTTCATCGACAATCGTGAGGGCGGCCTGATCATGGGCTCCACCGCCGCGATATCCAGTCTTTCCACCTCCGCTCTGGTGTCGGTGGCCAATGCGGGCACGATCAACGGCAATGTCAATCTTCTCTCGCCTGCGCCGTCCTATTACGGCTCCTACAACAAATATTGGGCCAAGATGGGCGGCATGCTCTACGGCAACCTCACGCTGGGTTCGGGAGACGCGTTGATCACCACCATTTCGGGCAGCGGCACCAGTGGCTATGCCGGGATCAACGGCACGGTCAGCGCGTCCAATTCGGTGCTGCGCTATGACGTGACCGGCAATGAAAGCGCGACGCTGGCCATGCGAAGCGGTTTCACCAGCCTTGGCTATCAGGTCGCGGGCGGCGCGGCGCTGACGCTGAACACGAACGGCGCCTTCGGCTCCACGGTCAATCTGGCGGGGCAGGGCAATGTGGTGCTCAACGGCACGATTGCCGCCACCAACGCGGTGGCGATACAGGAGGCCGCCGTCATGCAGCCCGGCATGACCACCCTTCCGACGGCGCTGACCATAACGAATAATGGCGCGCTCTCGATGACGCTGCAAAACAGTCCGTACTGGCCCGGATATGGGTCTGTTTTCCTGCAATCGAGCAATGTCATCAATAATGGCAAGATAAGTTTCACCGATCTCAACAACAGCGCCACCATAATAGCGGCGGTGTATACGGGCGGCGGCGTGACCAATAACGGCACGATCACCTCGAATGTCGGCTATGGGGTGCGCGCCTCCACACTTACGAACAACGGGACCATCACCGCAGGCAATTCGGCGGTCGTCATCGGCACCAATACCGTCAACACCACCGCCTCCATCACCAACAGCGGCACGTTGACCAGCACCGCAAGCGCGGCCATCACCAACGACAGCAGTTACAGCCCATATTACACGCTGACCAATCTGGCGGGCGGTACGATCACCGGCTTCGGCGATGCGATCCGCACCGCAGGGGGCACGATCATCAATTCGGGCACGATCAACGGCAACGTCAATCTGAACTATTGGGCGTCCAGCTTTTACAACATGCCCGGATTTTATGTTGCCAAGGGCGGCACGATCAACGGCAATCTGAACTTTGGCAACGCCGATGACTATCTGGTGGAGACCGGATCGGGTTTCGGCGTGACGGGCACGATCAACGGCGGGGCAGGCGTCAACTGGATCGGCCATCAGCGCAGCGGGACGGCCACGGTGTCGCTGGGCGGCGCGCTGCTTCCCGGCTTCACCAACGAATTCACACTGGCCTCAGGCGCTTCCTCGCAGGTCACGATCACCGGGCCGTCGGGCTATACGGACACTATCTATGTCGGCGGCGACGGCGCGATCATCAATCAGTTGGCCACGACCGGCATGGTTTCCTCGTTCAACTTTTCCGCGCCCACTTTTCCGCGCGCTCTGGACGGATTTCTCGGCAGCTTCTCCAATCGGGCCGATGTGGGCCGCCTGTTCCTGCTGACCTCCGCCTTCGACAATTCGGCCACTATCGGCACGGTCTATCGGGCGGAGAGCAACCTCACCCTGTTTACGAACAACGGTTTTTCATTCAGCAACAGCGGCACCATTCTCAATTCCGGCGGCGCCTCGTCCGTGTTTTTGCGCGGCACGACCGTGGGCAACAGCATCATCGCCAACAGCGGCACAATCATTGGCGGGATCGACCTTTCGATGACCGGCGCGGCGGGCTCCACCCTTGCGATCAACAATTCGGGCACGATCAACGGCTATGTGCGATACAGCAACGGGTTCGACCCTGTAACAAACGCCTTCATTCAGGTGATCACCAACAATGCCATGCTGATTTCGCTTTTGGACCAACAGCGGTTCAGCCTTGCCAACAGCGGCACGATCACGGGCGACATCATTCTTAATGGCGGGGACATGTCGGTCGTCAACACCGGCATGATCCGGGGCAGCCTGGCCACCGGGGCGGGCAATGACGCCATCGCCATGAACGGCGCGTTTTCCGGCAGCATCAATGGCGGCGCGGGCATCAACACGCTCTCGGTCAATGGCGGTTCGCAGGCGGCCCCCGTCGCCTTCGCCTCGGTGAGCAACATTGCCTCGATGACCCAGACGGGCGGCTTTGCCACGGTCTCGGGCATCGGCAGCTTTGGCAGCGTGATGATGACGGGCGGGCGGCTGGTGGGGCTGGCCGGATCGGTGATGAATGCGGACAGCTTTACTGTGGGGGGCAACGCCACTTTCGGTTCGGCGGGCGCGGTCAACGGCAATGTCGTGGTCAACGGCACGCTGAGCCCCGGCGCTTCGCCCGGCACCATGACAGTGAACGGCAATGTGACGCTGAACGGGGGATCGACTTCGCTGTTCGAAATTACGCCCACGGTTTCGGACAAGCTGATCGTCAACGGCAGGCTGACGATCCTGCCGGGCAGCACTTTGCAGATCGCCGCCTCTGCCCCGGTAAAGGTGGGCACAACGCTCAACCTGATCAGCGCGAGCGGGGGTGTTACAGGAACCTATGACACGGTGACGGGCATCACCGGGGCGGTTCGCAAACTGGCCAATGGCGATATGGGGCTGTTGGTGCAATTTGCCAATCCGGTCAATTATACGCCGCAGGTCCGCAATGCGATTGCCTATGTCAACAATGCCATGGCTGCGAACAGCGCTCCGGCGGCCTTGTTCCCGGCGCTTTCGGCGCTTCAGGACGGCAATGCCGCGCCGATCGCCTCGGCCTTTGCGCAATTGACGCCCGAACCTTATGCCGACGCCATGCAGATCGGCGCAGAAACCGCCCTGTCGCAGGCGGCGGCCTCGCGCTCCATGGGTGAGGGCGAGGTGAACGGGACGCCGCATCTCTTCGGCTTTGGCCAGATGCTGGGCAGCCTGCGCCAGTTCTCCGGCAATCAGGCGCAAGGCGTGAGCTCGGCCACGACCAATGGCTTTGGCGTGCTGGGCGGACTGGGCGTTGCCGGGGGCAATTATGCCGCTTCGGTCTATATGGGCTGGATGGATCAGGATCAGTCGGTCGCGATGCTGGGCGCTTCAACCAAGGCGCGCGGGGTGATCGGCGGTGTGGCGGCGCGCTTTGGCGAAATCACCCGGCTCACCCTTTCGGCCAATTACGACAGGGCCTTGGCCAAGACCCGCCGTTATGTGCCCGGCGCCGGGACGATCATGAGCAGCTATTTGCTGCCAAGCTGGTCTTTCGACGCCTCGATCAGCCATGCGGTGCCTCTGGGCGGGGGATGGGTCGTTCGCCCGCAGATCGGCACGACATGGGTCATTACCAAGCGCGGCGCGATTGATGAGGTCAGCCCTCATCCCTTTGCCCTGTCTGTAAACGCGGCGAGGATGGTGCAGGGCTTTGTCGATGCGGGGCTGAGTTTCGAAACCGCGCCCGATGCGGCCGGGCCTTGGCGGCGCTTCCTGACACTGGGCGCGCGCTATCGGGCCGAGGGCGGCCAGGCCGATACCACGGCGGGGCTGGCGGGCTATACGCCCGGTCTGACGGCGCTGGGCGTGGGTCGCAACCGGCTGGATGTCACCATGGCGGCGGGCGTCGAATACAGGCTGACGCCGGGCGCCAGCTTTTTCCTTAACGCCACGGGCGAGCTGGGCGTTGCGGGCAAGCGCGAAAGCGTAACGGGCGGGGTGCGTTTCCGGCTGTGA
PROTEIN sequence
Length: 1812
VIQNSNGRRSYRAALFVARISLAALAVGAPVRAWAECSPSPNPQLTDITCTGTTTNGVTLTAYYAPLTVVSDATVTNTGASAITVAIPSPNGYYSRNAVITVNGIVTAYGAPGITVSSGTTLVSTYDFSGTYASISVAPTGIVSGTTGIALTQSPGPYSIYSPTRVMVYNEGTISGTSGVAISTSGNYARLDSIINTGTGTIGAIAARFGQIHNSGTIEGGSLSAISQGNVDSNYLISNNSIIHSASNAATISIASAQSASLSNTIINSHVIANDGAGGAIYSGNYLTIENDAGATIASKGAATIANGSSLALNNLGLITNTGGGMGIIGSNVSINNYFLGTINALPGADAISVSGKLTLLNTGTINGNIVTTLGMDGAMLDSSAGTINGNVLLGPADDTVVANYVNGALVTGINGTLDGGGGTNLLQINFLKNAELSNALTLPTNFFVMNANVASGATVTLGQGFTAYNGLGINGAGSLVNKTTLFGTIQIGAQGSSLASFVNDGTIIANGTGVYDQNGKSLSNTGAILSLGGTGLVLTETNGTPNTNNTNSGAITGSTVGASLFASSLVNTGTISGATGVLLDMNSFIDNREGGLIMGSTAAISSLSTSALVSVANAGTINGNVNLLSPAPSYYGSYNKYWAKMGGMLYGNLTLGSGDALITTISGSGTSGYAGINGTVSASNSVLRYDVTGNESATLAMRSGFTSLGYQVAGGAALTLNTNGAFGSTVNLAGQGNVVLNGTIAATNAVAIQEAAVMQPGMTTLPTALTITNNGALSMTLQNSPYWPGYGSVFLQSSNVINNGKISFTDLNNSATIIAAVYTGGGVTNNGTITSNVGYGVRASTLTNNGTITAGNSAVVIGTNTVNTTASITNSGTLTSTASAAITNDSSYSPYYTLTNLAGGTITGFGDAIRTAGGTIINSGTINGNVNLNYWASSFYNMPGFYVAKGGTINGNLNFGNADDYLVETGSGFGVTGTINGGAGVNWIGHQRSGTATVSLGGALLPGFTNEFTLASGASSQVTITGPSGYTDTIYVGGDGAIINQLATTGMVSSFNFSAPTFPRALDGFLGSFSNRADVGRLFLLTSAFDNSATIGTVYRAESNLTLFTNNGFSFSNSGTILNSGGASSVFLRGTTVGNSIIANSGTIIGGIDLSMTGAAGSTLAINNSGTINGYVRYSNGFDPVTNAFIQVITNNAMLISLLDQQRFSLANSGTITGDIILNGGDMSVVNTGMIRGSLATGAGNDAIAMNGAFSGSINGGAGINTLSVNGGSQAAPVAFASVSNIASMTQTGGFATVSGIGSFGSVMMTGGRLVGLAGSVMNADSFTVGGNATFGSAGAVNGNVVVNGTLSPGASPGTMTVNGNVTLNGGSTSLFEITPTVSDKLIVNGRLTILPGSTLQIAASAPVKVGTTLNLISASGGVTGTYDTVTGITGAVRKLANGDMGLLVQFANPVNYTPQVRNAIAYVNNAMAANSAPAALFPALSALQDGNAAPIASAFAQLTPEPYADAMQIGAETALSQAAASRSMGEGEVNGTPHLFGFGQMLGSLRQFSGNQAQGVSSATTNGFGVLGGLGVAGGNYAASVYMGWMDQDQSVAMLGASTKARGVIGGVAARFGEITRLTLSANYDRALAKTRRYVPGAGTIMSSYLLPSWSFDASISHAVPLGGGWVVRPQIGTTWVITKRGAIDEVSPHPFALSVNAARMVQGFVDAGLSFETAPDAAGPWRRFLTLGARYRAEGGQADTTAGLAGYTPGLTALGVGRNRLDVTMAAGVEYRLTPGASFFLNATGELGVAGKRESVTGGVRFRL*