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scnpilot_p_inoc_scaffold_187_41

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 43935..44297

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J3V1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 119.0
  • Bit_score: 214
  • Evalue 5.20e-53
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 120.0
  • Bit_score: 214
  • Evalue 7.20e-53
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 120.0
  • Bit_score: 212
  • Evalue 5.50e-53

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGGCACGTGTCAAAAGGGGTGTTACCACCCGCGCCAAGCACAAGAATATTCTGGAACAGGCCAAGGGTTACCGCGGTCGTCGCAAGAATACGATCCGCGTTGCTCGTCAGGCCGTTGAAAAGGCCGGCCAGTACGCTTACCGCGACCGCAAGGTCAAGAAGCGTACCTTCCGCGCTCTGTGGATCCAGCGTATCAACGCTGCGGTTCGCGCCGAAGGCCTGACCTATTCGCAGTTCATCAACGGCATCAAGCTGGCTGGCATCCAACTGGACCGCAAGTCGCTGGCCGATCTGGCGCTGAACGAAGCGGCCGTGTTCTCGGCTGTTCTGGCTCAGGCCAAGGCTGCTCTGCCCGCCGCGTAA
PROTEIN sequence
Length: 121
MARVKRGVTTRAKHKNILEQAKGYRGRRKNTIRVARQAVEKAGQYAYRDRKVKKRTFRALWIQRINAAVRAEGLTYSQFINGIKLAGIQLDRKSLADLALNEAAVFSAVLAQAKAALPAA*