ggKbase home page

scnpilot_p_inoc_scaffold_187_135

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(140919..143753)

Top 3 Functional Annotations

Value Algorithm Source
Formate dehydrogenase, alpha subunit n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7A2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 941.0
  • Bit_score: 1687
  • Evalue 0.0
  • rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EGD59520.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 941.0
  • Bit_score: 1687
  • Evalue 0.0
NAD-dependent formate dehydrogenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 951.0
  • Bit_score: 1633
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2835
ATGGCCTATGAAATGCAACCCGATTTCGGCACCCCGGCGCGTGATGGCGCGCCGGTAACACTGACCATCGACGGCCGCGCCGTCACCGTTCCGGCGGGCACCAGCGTGATGCGCGCCGCCGCCGAAATCGGCGGGGCGATCCCCAAACTCTGCGCCACGGACAATATCGAGGCGTTTGGGTCTTGCCGGATGTGTCTGGTCGAGATCGAGGGCGCGCGGGGATTGCCTGCCAGTTGCACCACGCCGGTTTCGGCGGGCATGGTGGTAAAAACCCAGACGCCGCGCTTGGAGAAGATCCGGCGCGGGGTGATGGAGCTTTATATCTCCGACCACCCGCTCGACTGCCTGACCTGCAGCGCGAACAATGATTGCGAATTGCAGGATACCGCCGCGCAGGTCGGCCTGCGCGATGTGCGCTATGGCTATGCGGGCGAAAACCATCTGGGGCAGGCGCCGGATCTGTCCAACCCCTATTTCGCGTTTGACGCCAGCAAGTGCATCGTCTGCTCACGCTGCGTGCGGGCTTGCGAGGAAGTGCAGGGCACCTTTGCGCTGACCATCGAGGGACGCGGGTTTGATTCGGCCGTTTCCGCAGGCGCGGCTGCGGATGATTTCCTTTCCAGCGAATGCGTGTCCTGCGGGGCCTGTGTTCAGGCCTGCCCGACGGCGGCGCTGAATGAAAAATCAGTGGCGGAAATCGGTAAGCCCGAACGCGCCGTGGTGACGACCTGCGCCTATTGCGGCGTGGGCTGCACGTTCCGGGCGGAAATGCGCGGCGATCAACTGGTGCGCATGGTGCCGTGGAAGGATGGCAAGGCCAATCGCGGGCATAGCTGCGTCAAGGGCCGCTTTGCATGGGGCTATGCCAACCATGCAGACCGCATCACGCGCCCGATGATCCGCGAGAGCATCACCCAGCCATGGCGCGAAGTGTCGTGGGAGGAGGCGATCAGCTTTACCGCCAACCGCTTGAAGGCGATCAAGGCGCAATATGGCGCGCGGGCGCTGGGCGGGATCACGTCGAGCCGCTGCACCAATGAGGAAGCCTTCCTTGTCCAGAAACTGGTGCGCGGCGGGTTTGGCTCGAACAATGTCGATACTTGCGCGCGGGTCTGCCATTCGCCCACCGGCTATGGGTTGAAGACGACCTTTGGCACCAGCGCGGGGACGCAGGATTTCGACAGCGTTGAGGACAGCGACGTCATCCTCATCATCGGCGCGAACCCAACCGATGGGCATCCGGTGTTTGCCTCGCGCATGAAGAAGCGTTTGCGCCAAGGGGCCAAGCTGATCGTGATCGACCCGCGCCGGATCGACATGGTGCGCAGCCCGCATATCGAGGCCGCGCATCATCTGGCGCTGCAACCGGGCACGAATGTCGCGGTGCTGACGGCGCTCGCCCATGTGATCGTGACCGAAGGGCTGGCCGATGAGGATTTTGTCCGTGAGCGTTGCGACTGGGATGAATATCAGGATTGGGCGCGGTTTGTGTCGGACGCGCGCCATTCGCCCGAAACACTGGAACCGGTGACGCGGGTTCCAGCCGAAGAATTGCGGGCGGCGGCGCGGCTATTTGCCACAGGCGGTAACGGCGCGATCTATTACGGCCTTGGCGTGACCGAACATTCGCAGGGTTCCTCCACCGTCATGGCGATTGCCAATCTGGCGATGGCGACAGGCAATGTCGGGCGGCGCGGCGTGGGGGTGAACCCTCTGCGCGGGCAGAACAATGTGCAGGGCGCCTGCGACATGGGCTCGTTCCCGCATGAATTGACCGGTTATCGCCATATTTCCGATGGCGACACGCGGGCGCAGTTCGAAGCGGAATGGGGCGTGGCGCTGGATGCCGAACCGGGCCTGCGCATTCCCAATATGCTGGATGCGGCGGTCGATGGCAGCTTCCGCGCGATCTATATTCAGGGCGAGGATATTCTCCAGTCCGACCCCAACACGCATCATGTTGCCGCGGGTCTGGCGGCGATGGATTGCGTGATCGTGCATGACCTCTTCCTCAATGAAACCGCCAATTACGCCCATGTCTTCCTGCCGGGCAGCACTTTCCTTGAGAAGACCGGCACTTTCACCAATGCCGAGCGGCGCATCCAGATGGTGCGGCGGGTGATGGACCCGGCCAATGGCTATGAGGATTGGCAAGTCACGCAATTGCTGGCCCGCGCGATGGATCTGAATTGGGATTACAGCGATGCGGGCCAGATCATGGATGAGATCGCCCGCCTGACGCCTTCCTTCGCCGGGGTTTCCCATGCGCGGCTGGATGCCGAAGGGTCGCTGCAATGGCCGGTGAATGAGGCCCATCCCGATGGCAGCCCGATCATGCATGTGGATGGTTTCGTGCGTGGCAAGGGCAAGTTTGTCGTCACCGAATATATCCCCACCGATGAGCGCACCGGGCCGCGCTATCCGCTGCTGCTGACCACGGGGCGGATTCTCTCGCAATACAATGTGGGCGCGCAGACGCGGCGGACGGCCAATTCTGTCTGGCATGCCGAGGATGTGCTGGAAATCCACCCGACCGATGCGGAAAACCGGGGCCTGTCCAGTGGCGACTGGGTGAAGCTGGCAAGCCGTGCGGGCGAGACGACGTTGCGCGCGCTGGTGACGGATCGCGTGGCGCCCGGCGTGGTTTACACCACCTTCCACCACCCCGACACGCAGGCCAATGTGGTGACCACCGAGAACTCTGACTGGGCCACCAATTGCCCGGAATATAAGGTCACGGCGGTGCAGGTCATGCCTTCGAACGGGCCGACCGCGTGGCAGCGCGACTATGAAGCGCTGGCCCAGCAGGCGCGCAGGATCGAGGCAGCCGAATGA
PROTEIN sequence
Length: 945
MAYEMQPDFGTPARDGAPVTLTIDGRAVTVPAGTSVMRAAAEIGGAIPKLCATDNIEAFGSCRMCLVEIEGARGLPASCTTPVSAGMVVKTQTPRLEKIRRGVMELYISDHPLDCLTCSANNDCELQDTAAQVGLRDVRYGYAGENHLGQAPDLSNPYFAFDASKCIVCSRCVRACEEVQGTFALTIEGRGFDSAVSAGAAADDFLSSECVSCGACVQACPTAALNEKSVAEIGKPERAVVTTCAYCGVGCTFRAEMRGDQLVRMVPWKDGKANRGHSCVKGRFAWGYANHADRITRPMIRESITQPWREVSWEEAISFTANRLKAIKAQYGARALGGITSSRCTNEEAFLVQKLVRGGFGSNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEDSDVILIIGANPTDGHPVFASRMKKRLRQGAKLIVIDPRRIDMVRSPHIEAAHHLALQPGTNVAVLTALAHVIVTEGLADEDFVRERCDWDEYQDWARFVSDARHSPETLEPVTRVPAEELRAAARLFATGGNGAIYYGLGVTEHSQGSSTVMAIANLAMATGNVGRRGVGVNPLRGQNNVQGACDMGSFPHELTGYRHISDGDTRAQFEAEWGVALDAEPGLRIPNMLDAAVDGSFRAIYIQGEDILQSDPNTHHVAAGLAAMDCVIVHDLFLNETANYAHVFLPGSTFLEKTGTFTNAERRIQMVRRVMDPANGYEDWQVTQLLARAMDLNWDYSDAGQIMDEIARLTPSFAGVSHARLDAEGSLQWPVNEAHPDGSPIMHVDGFVRGKGKFVVTEYIPTDERTGPRYPLLLTTGRILSQYNVGAQTRRTANSVWHAEDVLEIHPTDAENRGLSSGDWVKLASRAGETTLRALVTDRVAPGVVYTTFHHPDTQANVVTTENSDWATNCPEYKVTAVQVMPSNGPTAWQRDYEALAQQARRIEAAE*