ggKbase home page

scnpilot_p_inoc_scaffold_238_15

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(15804..16646)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 4,5-dioxygenase, beta chain n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EH13_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 278.0
  • Bit_score: 465
  • Evalue 5.10e-128
  • rbh
protocatechuate 3,4-dioxygenase similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 278.0
  • Bit_score: 465
  • Evalue 1.40e-128
Protocatechuate 4,5-dioxygenase, beta chain {ECO:0000313|EMBL:EHJ59302.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 278.0
  • Bit_score: 465
  • Evalue 7.20e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGGCTGAAATCGTAGGCGCTTATTTCACCAGCCATGTGCCCGCCATCGGCGGCGCGATCCACAAGGGGCTGCAGCAGGAACCCTATTGGAAGCCCTTTTTCGACGGGTTCCACAAGGTTCACGAATGGCTGGCGCAGGTGAAGCCCGATGTGGCCATTGTGTTCAACAATGACCATGGCCTCAACTTCTTCCTCGACAAGATGCCCACCTTTGCCGTGGGCGCGGCGGCCGAATATCACAATGCCGACGAGGGCTGGGGCCTGCCGATCTACAAGCCCTTTGCCGGGCATACCGAGTTGAGCTGGCACATCATCAACAGCTTGGTTGAGGATGAGTTCGACATCACCACCTGTCAGAAGATGCTGGTGGACCATGCGCTCTCGATTCCCTTTGAACTGGCATGGCCCGATGTTGAGGCATGGCCGGTCAAGATCGTGCCCTTTGCCATCAATACGGTGCAGCACCCGCTGCCCTCGGCCAAGCGCTGTCTGGCGCTGGGTCAGGCGGTGAACAAGGCGCTGCAGAGCTGGACGGGCGACGAACGGATCGTCATCATCGGCACGGGCGGCCTGTCGCACCAGTTGGACGGCGAGCGAGCCGGTTTCATCAACCGCGATTATGACACATTCTGCATGGATAATCTTTCGGTCGATCCCGTCGCGCTGACCAAGGATTCGATCCACGAGATGGTGCGCAAGGCCGGTACGCAGGGCGTCGAAGTGCTCAATTGGATCGCGGCGCGCGGGGCCTTGGGCCAAGCTCCGGTTCAGGAGATTCACCGCAATTACCACATCCCGATTTCGAACACGGCGGCGGCCACCATGCTGATGGAACCGGCCTGA
PROTEIN sequence
Length: 281
MAEIVGAYFTSHVPAIGGAIHKGLQQEPYWKPFFDGFHKVHEWLAQVKPDVAIVFNNDHGLNFFLDKMPTFAVGAAAEYHNADEGWGLPIYKPFAGHTELSWHIINSLVEDEFDITTCQKMLVDHALSIPFELAWPDVEAWPVKIVPFAINTVQHPLPSAKRCLALGQAVNKALQSWTGDERIVIIGTGGLSHQLDGERAGFINRDYDTFCMDNLSVDPVALTKDSIHEMVRKAGTQGVEVLNWIAARGALGQAPVQEIHRNYHIPISNTAAATMLMEPA*