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scnpilot_p_inoc_scaffold_472_28

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 25529..26767

Top 3 Functional Annotations

Value Algorithm Source
Lycopene beta cyclase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQI3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 386.0
  • Bit_score: 428
  • Evalue 1.00e-116
  • rbh
Lycopene beta cyclase {ECO:0000313|EMBL:EJU12855.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 386.0
  • Bit_score: 428
  • Evalue 1.40e-116
lycopene cyclase similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 393.0
  • Bit_score: 407
  • Evalue 5.20e-111

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1239
ATGGCGGGAAATGACACGGATATTGCCATCCTCGGGGGCGGATTGGCAGGCGGGCTGGTAGCGCTGGCTCTGGCGGCGCGGCGGCCCGATCTGCGCATCCTGCTGGTCGAGCGGGAGGAGAAGCTGGGGGGGCACCATTTCTGGTCCTTCTTCCTCAGTGACATTCCGGTGGCCGCGCGCTGGTTGCTCAAACCCCTGGTAGTGGGCAAATGGGGCAGCCACAGCGTGCGTTTTTCCGGCAACCGCCGCCATCTGGGCAATCCCTATCGCACGATTTCGAGCGCCCGTTTCGATGCGGTCCTGCGCGAGGCTTTGCCTGCAGGCTCGATCCTTACCGGGGCCACGGTGACAGCCTTTGACCGGCGCGGTTTCACGCTGGCCGACGGACGGCAGTTTCGCGCGGGGGCGGTGATCGACGCGCGCGGCGCGGCGGCCTTTCCCGGCCTGCGTGGCGGGTGGCAGAAATTTCTGGGCCAGATGGTGCGCACCAGCGCCCCCCATGGCCTGAGCGCCCCCATCATCATGGACGGCAACCGGTCGCAACATGATGGGTTCCGCTTTGTCTATGTCCTGCCCTTTTCGGATGACACGGTGTTTATCGAGGACACCTATTATTCCGACACGCCTGACATCGACGCCCCCACCCTGCGCGAGCGCATCGAGGCCTATGCCAAGAGCCGCAGCTGGACCATTGTCGAGGTGCTGGACGAGGAGCAGGGCGTGTTGCCGGTGGTGGCCGAGGGCGAGCCCCATGCGCTGATCGAGGGTATGCATGGCGTGGCGCGGATCGGCGTGGCGGGCGGGCTGTTTCATCCGCTGACCGGCTATTCGCTGCCCACGGCGGTGCGCGTGGCGACGATGATTGCCGACATGTCCGATATGTCGGGCGATGCGATCGCCGGGGCGGTCGAGGATTATGCGCGGGCCCATTGGCGCGCGGGCGGCTTCTATCGCCTGCTGGCGCGGATGCTGTTCGGCGCGGCGCGGCCCGACAAGCGGCACCGGGTGTTCGCCCGTTTCTATCGTCTGGGCGACAGGCTGATCGAACGCTTCTATGCCGGGCAATCGACATGGGCGGATCGCGTCCGCCTGCTGGTCGGGCGGCCGCCGGTGTCTTTGATGGCGGCTCTGGCCTGTCTGGTCGGGCGGGGGCGCGAACTGGCCGATCTGGGGGCGCCTGGGCGCCTTTCTCAGGATACAACGATACCGGCCTTTGCCGGGGAAACCGAGGACGCATGA
PROTEIN sequence
Length: 413
MAGNDTDIAILGGGLAGGLVALALAARRPDLRILLVEREEKLGGHHFWSFFLSDIPVAARWLLKPLVVGKWGSHSVRFSGNRRHLGNPYRTISSARFDAVLREALPAGSILTGATVTAFDRRGFTLADGRQFRAGAVIDARGAAAFPGLRGGWQKFLGQMVRTSAPHGLSAPIIMDGNRSQHDGFRFVYVLPFSDDTVFIEDTYYSDTPDIDAPTLRERIEAYAKSRSWTIVEVLDEEQGVLPVVAEGEPHALIEGMHGVARIGVAGGLFHPLTGYSLPTAVRVATMIADMSDMSGDAIAGAVEDYARAHWRAGGFYRLLARMLFGAARPDKRHRVFARFYRLGDRLIERFYAGQSTWADRVRLLVGRPPVSLMAALACLVGRGRELADLGAPGRLSQDTTIPAFAGETEDA*