ggKbase home page

scnpilot_p_inoc_scaffold_1288_2

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(1281..1634)

Top 3 Functional Annotations

Value Algorithm Source
transposase ISAfe4 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B707D1 similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 117.0
  • Bit_score: 238
  • Evalue 2.50e-60
Transposase and inactivated derivative {ECO:0000313|EMBL:EAT07217.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 117.0
  • Bit_score: 234
  • Evalue 6.60e-59
isocitrate lyase similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 117.0
  • Bit_score: 134
  • Evalue 1.40e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. SKA58 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGATCTCGCTGGCGCCGGGCACTAAGGTCTATCTGGCGAGCAAGCCGGTCAGCATGCGGCTCGGCTTTGACGGGCTTGCCGCGCTGGTGCGCCCCTTGTTCGCGGTCGAGCCCTATGGCGGCCATGTCTTCCTGTTTCGCAGCAAGAGCGGCAATTACCTGAAGGCATTGCACTGGGATGGCAGCGGGCTTTGCCTGTTCGCAAAGCGTTTGGAACGCAGCCGTTTCGTGTGGCCGCCCTTGATCGAAGGCGGCGTTGTGCTGACCCCGGCCCAGTTCGCCTTGCTAATCGAGGCGATGGATTGGCGGCGCACGGTGGCACCCGAACCACCACGCACACCGGCCCAACTCTGA
PROTEIN sequence
Length: 118
MISLAPGTKVYLASKPVSMRLGFDGLAALVRPLFAVEPYGGHVFLFRSKSGNYLKALHWDGSGLCLFAKRLERSRFVWPPLIEGGVVLTPAQFALLIEAMDWRRTVAPEPPRTPAQL*