ggKbase home page

scnpilot_p_inoc_scaffold_1304_12

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(11244..12242)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:GAO54931.1}; EC=4.2.1.46 {ECO:0000313|EMBL:GAO54931.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 332.0
  • Bit_score: 559
  • Evalue 2.50e-156
NAD-dependent epimerase/dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3I7_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 332.0
  • Bit_score: 542
  • Evalue 3.90e-151
  • rbh
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 332.0
  • Bit_score: 542
  • Evalue 1.10e-151

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAAGGTTCTGGTTACGGGCGCGGCGGGTTTCATCGGCTACAGCCTTGCGGTCAAACTGCTGGCGCGCGGCGATTCCGTCATCGGCCTCGATATCGTCAATGATTACTATGACGTCACGCTCAAGGAAGCCCGCCTCGCCCGCCTGCGCGAGTTGGGCGGCGACCGCTTCACCTTTGTCCGCGCCGATTTCGCCCAATACGAACCGCTGGTCGAGGCGCTCTCGGGCCTGGAATTCGACCGCATCGTCCATCTGGGCGCGCAGGCGGGCGTGCGCTTTTCGATCACCAACCCCCACGCCTATCTGCATTCCAACCTTGCCGGGCATTTGAACATGCTGGAAATCGGGCGGCATCGCGGCGTGGAAAACATGGTCTATGCCTCCTCCTCCTCGGTCTATGGCGGCAACACCAAACTGCCCTTCGCCGTCGAAGACCGCGTTGACCAGCCCATCAGCCTCTATGCCGCCACCAAAAAGGCCGACGAGCTGATGAGCGAAACCTACGCCCATCTCTACCGCCTGCCGCTGACGGGCCTGCGCTTCTTCACCGTGTATGGTCCTTGGGGGCGGCCCGACATGATGATGTGGATCTTTACCAAGGCCATCGCCGCGGGCCAGCCGATCCCCGTCTTCAACAATGGCGATATGTACCGCGACTTCACCTATATCGACGACATCATCGCGGGCGTCATGGCCAGCCTCGACAACCCCGCCCCCGACGACGGCGAGGTCAAGGCAGGCGGATCGACCAAGCCCCACCGCCTCTACAACATCGGCAACCACAAGAGCGAACACCTGATGCGCGTGGTCGAAATCCTCGAAGAACAGATCGGCAAAAAAGCCATCATCGACTTCCAGCCCATGCAGCCGGGCGACGTGCGCCAGTCCTTCGCCGACATCGACGCCATCGCCCGCGACCACGGATACGCCCCCACCACCAGCATCGACGTGGGCGTGCCCAAGTTTATCGAGTGGTATAAGTTGTATCATGGGATTTGA
PROTEIN sequence
Length: 333
MKVLVTGAAGFIGYSLAVKLLARGDSVIGLDIVNDYYDVTLKEARLARLRELGGDRFTFVRADFAQYEPLVEALSGLEFDRIVHLGAQAGVRFSITNPHAYLHSNLAGHLNMLEIGRHRGVENMVYASSSSVYGGNTKLPFAVEDRVDQPISLYAATKKADELMSETYAHLYRLPLTGLRFFTVYGPWGRPDMMMWIFTKAIAAGQPIPVFNNGDMYRDFTYIDDIIAGVMASLDNPAPDDGEVKAGGSTKPHRLYNIGNHKSEHLMRVVEILEEQIGKKAIIDFQPMQPGDVRQSFADIDAIARDHGYAPTTSIDVGVPKFIEWYKLYHGI*