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scnpilot_p_inoc_scaffold_1397_13

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(10709..10993)

Top 3 Functional Annotations

Value Algorithm Source
Type IV conjugative transfer system protein TraL n=1 Tax=Novosphingobium sp. AP12 RepID=J3A014_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 94.0
  • Bit_score: 160
  • Evalue 1.20e-36
Scaffold12, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31284.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 94.0
  • Bit_score: 162
  • Evalue 2.60e-37
conjugal transfer protein TraL similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 94.0
  • Bit_score: 151
  • Evalue 1.50e-34

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Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGATCAAATATGAAATCGCCCGGCATCTCGATGATCCCGAACTCATCGGCTTTTGGACGCTCGATGAGTTCCTGGTGATGGTGGCGCCCTTTGTCTGGGGGGTGATCAGCGGGCATATCGTGATTGGTCTATCCGCAAGCGTATCAACGTGGTTTGGGTATCGCAAACTTAAAGCCGGACGTTCCATGTCCTGGATAATCCACGCGGCCTACTGGCATCTGCCCGGTCCGATTTTCGGGCTCAAAGTGTGTCCACCATCCCATCTGCGCGTCATGGCGGGCTGA
PROTEIN sequence
Length: 95
MIKYEIARHLDDPELIGFWTLDEFLVMVAPFVWGVISGHIVIGLSASVSTWFGYRKLKAGRSMSWIIHAAYWHLPGPIFGLKVCPPSHLRVMAG*