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scnpilot_p_inoc_scaffold_5284_7

Organism: SCNpilot_P_inoc_Novosphingobium_62_280

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 4161..4406

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AbrB family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPX2_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 81.0
  • Bit_score: 138
  • Evalue 2.40e-30
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.0
  • Coverage: 81.0
  • Bit_score: 138
  • Evalue 6.80e-31
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EZP68920.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 81.0
  • Bit_score: 138
  • Evalue 3.40e-30

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGACAGTTCAGGTGAGCATCACGCCGAATGGCCGGATGAGCCTGCCCGCCGATATTCGCAAGCGCCTTGGCGTCGCCGCCGGCGGCGCGCTTATCGTTGAGGAAACGCCGGACGGCGTGATCCTGCGCACGGTCGCTCAGTCCATCGCGCATGCCCAGGCGATCGCCCGCAAATATACGGCCGGCAATCCGGCTGCGTCTGTTGATGGCTTCATTGCCAATCGCAGGGCGGACAGCGGCGAATGA
PROTEIN sequence
Length: 82
MTVQVSITPNGRMSLPADIRKRLGVAAGGALIVEETPDGVILRTVAQSIAHAQAIARKYTAGNPAASVDGFIANRRADSGE*