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scnpilot_p_inoc_scaffold_972_6

Organism: SCNpilot_P_inoc_Mobile_elements_general

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 4904..7438

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein virB4 n=1 Tax=Pseudomonas aeruginosa S54485 RepID=U9P9K1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 836.0
  • Bit_score: 1367
  • Evalue 0.0
  • rbh
ptlC; type IV secretion system protein ptlC similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 837.0
  • Bit_score: 1364
  • Evalue 0.0
TraE protein {ECO:0000313|EMBL:CAC79179.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 836.0
  • Bit_score: 1362
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 2535
ATGTCTGCCCTGCCAAAACCTAAATACTTCGACCAAGTGAACAATGAAAGGGCGGTTGCGCCCTTCATTCCGTACAGCAGCCATGTGTCGCCGAACACCATCGTCACGACGCAGGGCGATTTCCTGCGCGTGTGGCGCGTGGCCGGCATCAGCTTCGAGACGGCAGAGCCGGACGAGATTCTGCGGCGCAAGGAACAACTCAACACGCTGCTGCGCTCCATCGCTACCAGCAACGTGGCGCTGTGGACGCACAACGTCCGCCGCCGCACGTCGGACAGGCTCAAGGGCGTGTACGACAACGACTTTTGCCGCGAGCTGGATCGCAAGTATTACGACAGCTTCGTGGGCTATCGCATGATGGCGAACGAGCTGTATCTGACGGTCATCTACCGGCCGAATCCGTCGCGGATCGGCAAGGCGATGGCGAAGTCGGCGCGGCGCACCGTCGATGAAATCCTCAAGGATCAGAAGGCGGCCATCCGCAAGCTGGACGACATCGCCTATCAGATCGAGGCCAGCATGCGCCGCTACGGCACCGACGAGAAGACCGGCATCGAGGAACTGCGCACCTATGAGGACGAGAACGGCATCGTGTGCTCGCAGGCGCTGGAGTTCTTGAACTTCCTGGTGTCCGGCGAGTGGCAGAAGGTGCGCGTGCCGGCCGGGCCGCTGAACGCTTACCTGGGCACGGCCTGGGTGTTCGTGGGCGCGGAGACTATCGAAATCCGCTCGCCGACGAAGACGCGCTACGCGATGGGCATCGACTTCAAGGACTACTCGGCGCACACCGAGCCGGGCATCTTGAACGGCCTGCTGTACGAGGATTACGAGTACGTCATCACGCAGTCGTTCAGCTTCATGAGCAAGCGCGATGGCAAGGACTTCCTGGAGCGGCAGCAACGCCAGTTGATGAACGCCGAGGACGGCAGCGCGACGCAAATCGCGGAAATGACGCAGGCCATTGACGAGCTGATTCAAGGTCAGTTCGTCATGGGCGAGTACCACTACTCGCTGCTGGTCTTCGGCGAGACGGTCGAGAAGGTGCGCCGCAACACCACGTCGGCCATGACGATCATTCAGGACAGGGGTTTTCTGTCCGCCTTGATCGCCACGGCGACCGACTCGGCTTTCTACGCGCAATTGCCGTGCAATTGGTCGTACCGGCCGCGCGTGGCCGGCTTGACCAGCAAGAACTTTGCGGGCCTGTGCAGCTTCCACAACTTCCGCGCCGGCAAACGCGACGGCAACCCGTGGGGGCAGGCCGTGACGCTGTTCAAGACGCCTTCGGGCCAGCCGCTGTATTTCAACTTCCACTACTCGAAGGGCGACGAAGACGCCTTCGACAAGAAGGTGCTCGGCAATACCCGCGTCATCGGCCAGTCCGGTGCGGGTAAGACGGTGCTGCTGAACATGCTTCTGTGCCAGTCGCAGAAATACAAGCCGCGCTCGCCTGTCGGCTTCACGACGGTGTTCTTCGACAAGGATCGCGGCGCGGAGCTGCTGATTCGCGCCATCGGCGGCAAGTATCTGGCCGTCAGGAACGGCCAGCCAACCGGTTTCAATCCGTTCCAGATGGAAGCCAACGAGACGAACATCCTGTTCCTGGAGAAGCTGATTCGCGTCCTGGTGTCGGCCGGTGGCGAGCGCGTCACCACGGCGGACGATGCGCGCATCAGTCATGCGGTGCGAACCGTCATGAAGATGCCGAAGGAGATTCGCCGGCTGTCGGTGGTGTTGCAGAACATCACCGAGGGCACCGACAAGGAAGACCGCGAAAACAGCGTGGCGAAGCGCCTCGCGCGGTGGTGCGTCGATGACGGCCACGGCAAGCGTGGCCCGTTCTGGTGGGTGCTGGACAACGCGACCGACCTCATCGACTTCACCACCCACGCGAACTATGGCTTCGACGGCACGCACTTCCTGGACAACAACGACGTGCGGACGCCGATTTCCATGTACCTGCTGCATCGCATGGATTCGGTCATCGACGGCCGCCGCTTCGTCTATTTCATGGACGAGGCTTGGAAGTGGGTCGATGCCGAGGCGTTCGCGGACTTCGCGGGCGACAAGCAATTGACCATTCGCAAGCAAAACGGCCTCGGCGTGTTCGCTACGCAAATGCCTAGCAGCATGTTGAAGTCGAAGATTGCCGCCTCCCTGGTGCAACAGGTGGCGACGGAAATCTACCTGCCTAACCCGAAGGCGGACTTCACCGAATACACCGAGGGCTTCAAATGCACGCCCTCGGAGTTTGAAATCATCAAGACGATGGGCGAAGAAAGCCGCATGTTCCTGGTGAAGCAAGGCCATCAGTCGATGATCGGCCGCTTCGATCTGAGCGACGTTAAAGACGCTGACGGGAACACGGTAATTGGCTTCGGCGATGAACTCGCCATTTTGTCGGGCAGCTCCGATAACGTCGAACTGCTCGATGAAATCCTCGCCGAAGTCGGCGATGACCCGGAAGTGTGGGTTCCCGTGTTCCACCAGCGCCGCAAGGCGCGGGTGGCGTCCTCTAAGCAGCAAGAAAGGTGA
PROTEIN sequence
Length: 845
MSALPKPKYFDQVNNERAVAPFIPYSSHVSPNTIVTTQGDFLRVWRVAGISFETAEPDEILRRKEQLNTLLRSIATSNVALWTHNVRRRTSDRLKGVYDNDFCRELDRKYYDSFVGYRMMANELYLTVIYRPNPSRIGKAMAKSARRTVDEILKDQKAAIRKLDDIAYQIEASMRRYGTDEKTGIEELRTYEDENGIVCSQALEFLNFLVSGEWQKVRVPAGPLNAYLGTAWVFVGAETIEIRSPTKTRYAMGIDFKDYSAHTEPGILNGLLYEDYEYVITQSFSFMSKRDGKDFLERQQRQLMNAEDGSATQIAEMTQAIDELIQGQFVMGEYHYSLLVFGETVEKVRRNTTSAMTIIQDRGFLSALIATATDSAFYAQLPCNWSYRPRVAGLTSKNFAGLCSFHNFRAGKRDGNPWGQAVTLFKTPSGQPLYFNFHYSKGDEDAFDKKVLGNTRVIGQSGAGKTVLLNMLLCQSQKYKPRSPVGFTTVFFDKDRGAELLIRAIGGKYLAVRNGQPTGFNPFQMEANETNILFLEKLIRVLVSAGGERVTTADDARISHAVRTVMKMPKEIRRLSVVLQNITEGTDKEDRENSVAKRLARWCVDDGHGKRGPFWWVLDNATDLIDFTTHANYGFDGTHFLDNNDVRTPISMYLLHRMDSVIDGRRFVYFMDEAWKWVDAEAFADFAGDKQLTIRKQNGLGVFATQMPSSMLKSKIAASLVQQVATEIYLPNPKADFTEYTEGFKCTPSEFEIIKTMGEESRMFLVKQGHQSMIGRFDLSDVKDADGNTVIGFGDELAILSGSSDNVELLDEILAEVGDDPEVWVPVFHQRRKARVASSKQQER*