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scnpilot_p_inoc_scaffold_558_23

Organism: SCNpilot_P_inoc_Flavobacteriales_40_82

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24273..24971)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=2 Tax=Marinobacter RepID=E4PNP7_MARAH similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 168.0
  • Bit_score: 95
  • Evalue 6.80e-17
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR {ECO:0000313|EMBL:CEJ71084.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriace similarity UNIPROT
DB: UniProtKB
  • Identity: 30.1
  • Coverage: 173.0
  • Bit_score: 99
  • Evalue 5.00e-18
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 168.0
  • Bit_score: 95
  • Evalue 1.90e-17

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Taxonomy

Chryseobacterium oranimense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 699
ATGTTAGCTAATTTTGCAAATGTGTTTTTTATTATTTTCGGGCAGAAACCCAATGGTGTGAAGACAAAAGACAAAATTTTACTTAAAGCGATACAGTTATTCAATGAGGAAGGAGTTGAAAATGTGACCACACTTTATATTTCCCAACAAATGGGAATAAGTCTGGGAAATCTGCATTATCATTACCCGAACAGAAATGAGCTTTTAAAAGCAGCTATAGACCGGTTTTTGCAAAGCATGGAGGCATTAACAGCTGAGCTTATGAAAACGCAGCTTTCGGATTTTATGCAGAAAGCATTTTATACACAGTTTGTTACCTTTCGTGAAATCTGGAAATACCGTTTTCTCTTCAGAGACCGGTTAATCATTGCCCGTAGAATGGATTATCTGGAACTGCTTTTTAAGGAGATGATTCGTCAAAGAAAGCTGGATTTTGATAAAACAACGGAAGACTTAAAACAAGCAGGACTGATGCGGGAAGATATTTCAGACAAAGTCAGAGATGCTTTTTTTCAGCAGCTTGTCATCGGGAATAACAGCTGGGTGGGATATTGCGATCTGTTTGATTTTGAGGGAGCCCCATATCTTTATTTTGCAGAACAATCCGTTTGGGCATGGAGGTCTTATTTTAACTGTTCAGAGAAAGAAATGGAAGATGCCATCAGTAAAGTGCAGCTGTTGGTTAAAAGTGAGAAATGA
PROTEIN sequence
Length: 233
MLANFANVFFIIFGQKPNGVKTKDKILLKAIQLFNEEGVENVTTLYISQQMGISLGNLHYHYPNRNELLKAAIDRFLQSMEALTAELMKTQLSDFMQKAFYTQFVTFREIWKYRFLFRDRLIIARRMDYLELLFKEMIRQRKLDFDKTTEDLKQAGLMREDISDKVRDAFFQQLVIGNNSWVGYCDLFDFEGAPYLYFAEQSVWAWRSYFNCSEKEMEDAISKVQLLVKSEK*