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ACD11_15

Alias: ACD11_475.63843.30

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD11_15_1

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81..539
DNA (459bp) protein (153aa)
hypothetical protein
seg (db=Seg db_id=seg from=45 to=54)
UPF0079 (db=HMMPfam db_id=PF02367 from=12 to=146 evalue=2.1e-32 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
HI0065_YjeE: ATPase, YjeE family (db=HMMTigr db_id=TIGR00150 from=7 to=152 evalue=4.5e-28 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
ACD11_15_2

Not on your lists

579..1238
DNA (660bp) protein (220aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=29 to=40)
CSA_PPIASE_1 (db=PatternScan db_id=PS00170 from=95 to=112 evalue=0.0 interpro_id=IPR020892 interpro_description=Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site GO=Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755), Biological Process: protein folding (GO:0006457))
ACD11_15_3

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1825..4527
DNA (2703bp) protein (901aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9M6_CLOTS (db=UNIREF evalue=0.0 bit_score=652.0 identity=43.24 coverage=95.449500554939)
seg (db=Seg db_id=seg from=575 to=586)
ACD11_15_4

Not on your lists

4547..5893
DNA (1347bp) protein (449aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=419 to=437)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=27)
seg (db=Seg db_id=seg from=11 to=20)
seg (db=Seg db_id=seg from=48 to=64)
ACD11_15_5

Not on your lists

5919..6815
DNA (897bp) protein (299aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
seg (db=Seg db_id=seg from=222 to=241)
seg (db=Seg db_id=seg from=100 to=112)
fpg: formamidopyrimidine-DNA glycosylase (db=HMMTigr db_id=TIGR00577 from=1 to=297 evalue=7.4e-65 interpro_id=IPR000191 interpro_description=DNA glycosylase/AP lyase GO=Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidized purine base lesion DNA N-glycosylase activity (GO:0008534))
ACD11_15_6

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6836..8005
DNA (1170bp) protein (390aa)
PT repeat-containing protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVY1_9FIRM (db=UNIREF evalue=5.0e-21 bit_score=105.0 identity=26.1 coverage=77.1794871794872)
hypothetical protein
seg (db=Seg db_id=seg from=6 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
ACD11_15_7

Not on your lists

8134..9099
DNA (966bp) protein (322aa)
DNA polymerase III
seg (db=Seg db_id=seg from=165 to=177)
holA: DNA polymerase III, delta subunit (db=HMMTigr db_id=TIGR01128 from=1 to=319 evalue=4.4e-34 interpro_id=IPR005790 interpro_description=DNA polymerase III, delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
DNA polymerase III clamp loader subunits, C-terminal domain (db=superfamily db_id=SSF48019 from=201 to=321 evalue=1.8e-20 interpro_id=IPR008921 interpro_description=DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
ACD11_15_8

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comp(9150..9464)
DNA (315bp) protein (105aa)
30S ribosomal protein S20
Ribosomal_S20p (db=HMMPfam db_id=PF01649 from=18 to=98 evalue=1.2e-19 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:1.20.58.110 from=10 to=98 evalue=7.1e-19 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S20: ribosomal protein S20 (db=HMMTigr db_id=TIGR00029 from=15 to=101 evalue=8.3e-19 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD11_15_9

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comp(9545..9823)
DNA (279bp) protein (93aa)
DUF721 (db=HMMPfam db_id=PF05258 from=45 to=91 evalue=2.1e-08 interpro_id=IPR007922 interpro_description=Protein of unknown function DUF721)
Uncharacterized protein {ECO:0000313|EMBL:EKE15622.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_15_10

Not on your lists

comp(9830..10978)
DNA (1149bp) protein (383aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
no description (db=HMMSmart db_id=SM00480 from=17 to=378 evalue=7.4e-78 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=382 evalue=9.5e-74 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
no description (db=Gene3D db_id=G3DSA:3.10.150.10 from=1 to=122 evalue=3.8e-27 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD11_15_11

Not on your lists

comp(11018..12418)
DNA (1401bp) protein (467aa)
chromosomal replication initiator protein DnaA
chromosomal replication initiator protein DnaA
chromosomal replication initiator protein DnaA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2133 (db=UNIREF evalue=1.0e-111 bit_score=407.0 identity=45.91 coverage=95.93147751606)
seg (db=Seg db_id=seg from=444 to=455)
ACD11_15_12

Not on your lists


12897..13238
DNA (342bp) protein (114aa)
ribonuclease P protein component (EC:3.1.26.5)
seg (db=Seg db_id=seg from=102 to=113)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=2 to=108 evalue=7.9e-23 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=6 to=111 evalue=6.8e-22 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
ACD11_15_13

Not on your lists

13239..13967
DNA (729bp) protein (243aa)
60 kDa inner membrane insertion protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=48)
seg (db=Seg db_id=seg from=31 to=44)
ACD11_15_14

Not on your lists

14009..14482
DNA (474bp) protein (158aa)
jag; jag protein
seg (db=Seg db_id=seg from=3 to=14)
R3H (db=HMMPfam db_id=PF01424 from=100 to=153 evalue=7.8e-11 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=HMMSmart db_id=SM00393 from=75 to=154 evalue=1.8e-10 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD11_15_15

Not on your lists

14519..15946
DNA (1428bp) protein (476aa)
heteropolysaccharide repeat-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=446 to=468)
transmembrane_regions (db=TMHMM db_id=tmhmm from=419 to=441)
ACD11_15_16

Not on your lists

15995..16858
DNA (864bp) protein (288aa)
glycosyl transferase family protein
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=263 evalue=2.7e-52)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=5 to=256 evalue=7.1e-34)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=9 to=178 evalue=6.5e-28 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD11_15_17

Not on your lists

16858..17625
DNA (768bp) protein (256aa)
glycosyltransferase, group 2 family protein
seg (db=Seg db_id=seg from=239 to=250)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=253 evalue=4.3e-38)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=218 evalue=4.8e-23)
ACD11_15_18

Not on your lists

17649..18917
DNA (1269bp) protein (423aa)
O-antigen polymerase family protein n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THF5_HELMI (db=UNIREF evalue=1.0e-08 bit_score=64.7 identity=29.44 coverage=51.7730496453901)
O-antigen polymerase family protein (db=KEGG evalue=1.0e-08 bit_score=64.7 identity=29.44 coverage=51.7730496453901)
transmembrane_regions (db=TMHMM db_id=tmhmm from=375 to=393)
transmembrane_regions (db=TMHMM db_id=tmhmm from=397 to=414)
ACD11_15_19

Not on your lists

18889..20118
DNA (1230bp) protein (410aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
seg (db=Seg db_id=seg from=12 to=24)
seg (db=Seg db_id=seg from=46 to=58)
seg (db=Seg db_id=seg from=67 to=83)
ACD11_15_20

Not on your lists

comp(20075..21205)
DNA (1131bp) protein (377aa)
seg (db=Seg db_id=seg from=317 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Tricorn protease N-terminal domain (db=superfamily db_id=SSF69304 from=64 to=376 evalue=5.4e-16)
no description (db=Gene3D db_id=G3DSA:2.120.10.30 from=73 to=273 evalue=3.5e-08 interpro_id=IPR011042 interpro_description=Six-bladed beta-propeller, TolB-like)
ACD11_15_21

Not on your lists

comp(21221..22198)
DNA (978bp) protein (326aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
seg (db=Seg db_id=seg from=78 to=89)
ACD11_15_22

Not on your lists

comp(22218..24953)
DNA (2736bp) protein (912aa)
seg (db=Seg db_id=seg from=882 to=896)
seg (db=Seg db_id=seg from=329 to=344)
seg (db=Seg db_id=seg from=110 to=119)
transmembrane_regions (db=TMHMM db_id=tmhmm from=882 to=904)
ACD11_15_23

Not on your lists

comp(24996..25634)
DNA (639bp) protein (213aa)
seg (db=Seg db_id=seg from=198 to=206)
seg (db=Seg db_id=seg from=5 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=208)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=184)
ACD11_15_24

Not on your lists

26138..26302
DNA (165bp) protein (55aa)
seg (db=Seg db_id=seg from=32 to=43)
Uncharacterized protein {ECO:0000313|EMBL:EKE15637.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_15_25

Not on your lists

comp(26429..26782)
DNA (354bp) protein (118aa)
DksA; DnaK suppressor protein
coiled-coil (db=Coil db_id=coil from=63 to=88 evalue=NA)
ZF_DKSA_1 (db=PatternScan db_id=PS01102 from=92 to=116 evalue=0.0 interpro_id=IPR020458 interpro_description=Zinc finger, DksA/TraR C4-type conserved site)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=89 to=117 evalue=2.2e-08)
ACD11_15_26

Not on your lists

comp(26848..27279)
DNA (432bp) protein (144aa)
endonuclease
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=27 to=134 evalue=5.0e-19 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
UPF0102 (db=HMMPfam db_id=PF02021 from=29 to=124 evalue=1.1e-16 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
UPF0102 (db=HAMAP db_id=MF_00048 from=22 to=137 evalue=18.068 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
ACD11_15_27

Not on your lists

comp(28007..29119)
DNA (1113bp) protein (371aa)
seg (db=Seg db_id=seg from=239 to=253)
seg (db=Seg db_id=seg from=203 to=216)
seg (db=Seg db_id=seg from=115 to=139)
seg (db=Seg db_id=seg from=61 to=75)
ACD11_15_28

Not on your lists


comp(29198..31306)
DNA (2109bp) protein (703aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSC0_9FIRM (db=UNIREF evalue=0.0 bit_score=747.0 identity=55.6 coverage=97.8662873399715)
seg (db=Seg db_id=seg from=661 to=673)
ACD11_15_29

Not on your lists

comp(31521..32009)
DNA (489bp) protein (163aa)
hypothetical protein
DUF88 (db=HMMPfam db_id=PF01936 from=5 to=153 evalue=8.8e-36)
hypothetical protein alias=ACD11_475.63843.30G0029,ACD11_475.63843.30_29,ACD11_C00015G00029 id=3157 tax=ACD11 species=Haloarcula marismortui genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE15642.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD11_15_30

Not on your lists


comp(32078..32347)
DNA (270bp) protein (90aa)
rpsO; 30S ribosomal protein S15
seg (db=Seg db_id=seg from=35 to=48)
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=39 to=69 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying items 1-30 of 60 in total

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