Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) | similarity |
KEGG
DB: KEGG |
39.9 | 313.0 | 215 | 1.70e-53 | hpk:Hprae_0732 |
PSI_RLU (db=PatternScan db_id=PS01129 from=137 to=151 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | hpk:Hprae_0732 |
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=8 to=310 evalue=8.8e-64 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 8.80e-64 | hpk:Hprae_0732 |
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=3 to=280 evalue=2.2e-59) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 2.20e-59 | hpk:Hprae_0732 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=69 to=310 evalue=5.6e-55 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
null | null | null | 5.60e-55 | hpk:Hprae_0732 |
PseudoU_synth_2 (db=HMMPfam db_id=PF00849 from=86 to=248 evalue=4.2e-31 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.20e-31 | hpk:Hprae_0732 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=12 to=63 evalue=1.2e-09) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.20e-09 | hpk:Hprae_0732 |
S4 (db=HMMPfam db_id=PF01479 from=14 to=59 evalue=1.6e-09 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.60e-09 | hpk:Hprae_0732 |
no description (db=HMMSmart db_id=SM00363 from=13 to=76 evalue=8.5e-09 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 8.50e-09 | hpk:Hprae_0732 |
S4 (db=ProfileScan db_id=PS50889 from=13 to=75 evalue=14.527 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
null | null | null | 1.45e+01 | hpk:Hprae_0732 |
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" |
UNIPROT
DB: UniProtKB |
100.0 | 310.0 | 612 | 4.00e-172 | K2EZ40_9BACT | |
pseudouridine synthase, RluA family; K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] alias=ACD11_475.63843.30G0059,ACD11_475.63843.30_59,ACD11_C00015G00059 id=3208 tax=ACD11 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i | similarity |
UNIREF
DB: UNIREF90 |
100.0 | null | 611 | 1.20e-172 | hpk:Hprae_0732 |