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ACD28_38

Alias: ACD28_74774.14484.11

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_38_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

324..902
DNA (579bp) protein (193aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
ACD28_38_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

915..1340
DNA (426bp) protein (142aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=111)
ACD28_38_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1372..1803
DNA (432bp) protein (144aa)
hypothetical protein
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=142 evalue=1.1e-22)
AHSA1 (db=HMMPfam db_id=PF08327 from=14 to=140 evalue=3.5e-22 interpro_id=IPR013538 interpro_description=Activator of Hsp90 ATPase homologue 1-like GO=Biological Process: response to stress (GO:0006950))
no description (db=Gene3D db_id=G3DSA:3.30.530.40 from=6 to=132 evalue=6.4e-05)
ACD28_38_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

2082..3563
DNA (1482bp) protein (494aa)
hypothetical protein
ABC transporter, ATP-binding protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VDQ6_9RHOB (db=UNIREF evalue=4.0e-51 bit_score=206.0 identity=31.57 coverage=94.7368421052632)
seg (db=Seg db_id=seg from=142 to=154)
coiled-coil (db=Coil db_id=coil from=267 to=288 evalue=NA)
ACD28_38_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3641..3979
DNA (339bp) protein (113aa)
3641..3979 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_38_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4189..4293
DNA (105bp) protein (35aa)
seg (db=Seg db_id=seg from=3 to=15)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_38_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4296..4682
DNA (387bp) protein (129aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
ACD28_38_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4691..5491
DNA (801bp) protein (267aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
coiled-coil (db=Coil db_id=coil from=38 to=59 evalue=NA)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=5 to=235 evalue=3.1e-75 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
17-BETA HYDROXYSTEROID DEHYDROGENASE (db=HMMPanther db_id=PTHR19410:SF38 from=5 to=235 evalue=3.1e-75)
ACD28_38_9
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

5661..5918
DNA (258bp) protein (86aa)
5661..5918 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_38_10

Not on your lists

6219..6380
DNA (162bp) protein (54aa)
6219..6380 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD92628.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_38_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

6476..6736
DNA (261bp) protein (87aa)
Putative zinc ribbon domain
coiled-coil (db=Coil db_id=coil from=56 to=77 evalue=NA)
hypothetical protein alias=ACD28_C00038G00011,ACD28_74774.14484.11G0011,ACD28_74774.14484.11_11 id=31229 tax=ACD28 species=Clostridium kluyveri genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=PER organism_desc=PER
Putative uncharacterized protein Tax=GWA2_PER_44_7
ACD28_38_12

Not on your lists

6752..7153
DNA (402bp) protein (134aa)
large conductance mechanosensitive channel protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
Gated mechanosensitive channel (db=superfamily db_id=SSF81330 from=26 to=131 evalue=1.6e-16 interpro_id=IPR001185 interpro_description=Large-conductance mechanosensitive channel GO=Molecular Function: ion channel activity (GO:0005216), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021))
MscL (db=HMMPfam db_id=PF01741 from=18 to=106 evalue=3.2e-15 interpro_id=IPR001185 interpro_description=Large-conductance mechanosensitive channel GO=Molecular Function: ion channel activity (GO:0005216), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021))
ACD28_38_13
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

7166..7471
DNA (306bp) protein (102aa)
coiled-coil (db=Coil db_id=coil from=17 to=38 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_38_14

Not on your lists

7444..7917
DNA (474bp) protein (158aa)
smpB; SsrA-binding protein
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=13 to=155 evalue=3.1e-63 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=6 to=137 evalue=1.2e-42 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=6 to=134 evalue=8.2e-37 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
ACD28_38_15

Not on your lists

7938..8783
DNA (846bp) protein (282aa)
nadE; NAD+ synthase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=5 Tax=Fusobacterium RepID=C3WIN6_9FUSO (db=UNIREF evalue=5.0e-46 bit_score=188.0 identity=42.86 coverage=88.2978723404255)
NAD_synthase (db=HMMPfam db_id=PF02540 from=37 to=275 evalue=1.9e-71 interpro_id=IPR022310 interpro_description=NAD/GMP synthase)
nadE: NAD+ synthetase (db=HMMTigr db_id=TIGR00552 from=31 to=281 evalue=8.1e-71 interpro_id=IPR003694 interpro_description=NAD synthase GO=Molecular Function: NAD+ synthase (glutamine-hydrolyzing) activity (GO:0003952), Molecular Function: ATP binding (GO:0005524), Biological Process: NAD biosynthetic process (GO:0009435))
ACD28_38_16

Not on your lists

comp(8788..9435)
DNA (648bp) protein (216aa)
seg (db=Seg db_id=seg from=32 to=43)
seg (db=Seg db_id=seg from=175 to=186)
Uncharacterized protein {ECO:0000313|EMBL:EKD92634.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_38_17

Not on your lists

9499..10026
DNA (528bp) protein (176aa)
nicotinamide-nucleotide adenylyltransferase
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=5 to=170 evalue=2.5e-40 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=3 to=168 evalue=8.9e-26)
CTP_transf_2 (db=HMMPfam db_id=PF01467 from=6 to=134 evalue=4.1e-14 interpro_id=IPR004820 interpro_description=Cytidylyltransferase GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: nucleotidyltransferase activity (GO:0016779))
ACD28_38_18
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

10214..11656
DNA (1443bp) protein (481aa)
phosphomannomutase (EC:5.4.2.8)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXM3_DESOH (db=UNIREF evalue=1.0e-88 bit_score=330.0 identity=43.07 coverage=92.5155925155925)
seg (db=Seg db_id=seg from=88 to=100)
ACD28_38_19

Not on your lists

comp(11631..12020)
DNA (390bp) protein (130aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=111)
Uncharacterized protein {ECO:0000313|EMBL:EKD92622.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_38_20
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(12117..13529)
DNA (1413bp) protein (471aa)
12117..13529 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT74860.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
ACD28_38_21
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(13542..14522)
DNA (981bp) protein (327aa)
13542..14522 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKT74008.1}; TaxID=1619057 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
Displaying 21 items

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