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ACD28_102

Alias: ACD28_22942.28216.11

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_102_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

110..418
DNA (309bp) protein (103aa)
110..418 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_102_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

566..967
DNA (402bp) protein (134aa)
566..967 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_102_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1016..1633
DNA (618bp) protein (206aa)
major intrinsic protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
ACD28_102_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

1743..2039
DNA (297bp) protein (99aa)
1743..2039 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_102_5

Not on your lists

comp(2036..2662)
DNA (627bp) protein (209aa)
translation elongation factor P
efp: translation elongation factor P (db=HMMTigr db_id=TIGR00038 from=24 to=208 evalue=6.3e-84 interpro_id=IPR011768 interpro_description=Translation elongation factor P GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: cytoplasm (GO:0005737), Biological Process: translational elongation (GO:0006414))
no description (db=HMMSmart db_id=SM00841 from=151 to=207 evalue=1.7e-27 interpro_id=IPR015365 interpro_description=Elongation factor P, C-terminal)
Elong-fact-P_C (db=HMMPfam db_id=PF09285 from=151 to=207 evalue=1.8e-22 interpro_id=IPR015365 interpro_description=Elongation factor P, C-terminal)
ACD28_102_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(2638..3873)
DNA (1236bp) protein (412aa)
O-antigen polymerase
O-antigen polymerase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP47_9FIRM (db=UNIREF evalue=6.0e-14 bit_score=82.4 identity=27.85 coverage=54.6116504854369)
transmembrane_regions (db=TMHMM db_id=tmhmm from=383 to=405)
transmembrane_regions (db=TMHMM db_id=tmhmm from=333 to=355)
ACD28_102_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3904..4509
DNA (606bp) protein (202aa)
rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Ham1p_like (db=HMMPfam db_id=PF01725 from=6 to=197 evalue=1.1e-42 interpro_id=IPR002637 interpro_description=Ham1-like protein GO=Molecular Function: hydrolase activity (GO:0016787))
ITPase-like (db=superfamily db_id=SSF52972 from=3 to=200 evalue=2.4e-40)
no description (db=Gene3D db_id=G3DSA:3.90.950.10 from=4 to=197 evalue=8.7e-39)
ACD28_102_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(4506..4958)
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=137 to=148)
seg (db=Seg db_id=seg from=11 to=23)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=26 evalue=5.0)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_102_9

Not on your lists

comp(5022..7823)
DNA (2802bp) protein (934aa)
Penicillin-binding protein, 1A family n=2 Tax=Chloroflexus RepID=A9WDV7_CHLAA (db=UNIREF evalue=2.0e-112 bit_score=410.0 identity=36.97 coverage=72.9122055674518)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=32 to=52)
ACD28_102_10

Not on your lists

comp(8043..8435)
DNA (393bp) protein (131aa)
seg (db=Seg db_id=seg from=52 to=62)
Uncharacterized protein {ECO:0000313|EMBL:EKD93525.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_102_11
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

8600..9055
DNA (456bp) protein (152aa)
hypothetical protein
seg (db=Seg db_id=seg from=69 to=78)
NIF3 (db=HMMPfam db_id=PF01784 from=1 to=137 evalue=1.6e-13 interpro_id=IPR002678 interpro_description=NGG1p interacting factor 3, NIF3)
hypothetical protein alias=ACD28_22942.28216.11G0011,ACD28_22942.28216.11_11,ACD28_C00102G00011 id=31994 tax=ACD28 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=PER organism_desc=PER
ACD28_102_12
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(9210..11972)
DNA (2763bp) protein (921aa)
phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20)
phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase beta chain n=6 Tax=Geobacillus RepID=SYFB_GEOKA (db=UNIREF evalue=9.0e-104 bit_score=382.0 identity=33.67 coverage=84.4733984799131)
seg (db=Seg db_id=seg from=213 to=225)
ACD28_102_13

Not on your lists

12095..12262
DNA (168bp) protein (56aa)
seg (db=Seg db_id=seg from=35 to=46)
Uncharacterized protein {ECO:0000313|EMBL:EKD93507.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_102_14

Not on your lists

12272..12865
DNA (594bp) protein (198aa)
seg (db=Seg db_id=seg from=1 to=13)
Uncharacterized protein {ECO:0000313|EMBL:EKD93508.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_102_15

Not on your lists


comp(12843..13883)
DNA (1041bp) protein (347aa)
Phenylalanyl-tRNA synthetase, alpha subunit n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SP8_SOLUE (db=UNIREF evalue=2.0e-110 bit_score=402.0 identity=51.45 coverage=97.6945244956772)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=8 to=346 evalue=3.1e-120)
ACD28_102_16

Not on your lists

comp(13916..14260)
DNA (345bp) protein (115aa)
13916..14260 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93510.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_102_17
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(14385..14660)
DNA (276bp) protein (92aa)
bacterial nucleoid DNA-binding protein
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=91 evalue=8.4e-31 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=90 evalue=1.3e-30 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACD28_102_18

Not on your lists

14942..17182
DNA (2241bp) protein (747aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7H8_PELCD (db=UNIREF evalue=0.0 bit_score=732.0 identity=49.67 coverage=98.2597054886212)
seg (db=Seg db_id=seg from=616 to=640)
ACD28_102_19
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

17203..17472
DNA (270bp) protein (90aa)
seg (db=Seg db_id=seg from=66 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
ACD28_102_20
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

17542..17835
DNA (294bp) protein (98aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=83)
seg (db=Seg db_id=seg from=74 to=85)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_102_21
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

17958..18146
DNA (189bp) protein (63aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_102_22
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(18286..19932)
DNA (1647bp) protein (549aa)
seg (db=Seg db_id=seg from=287 to=303)
seg (db=Seg db_id=seg from=6 to=20)
coiled-coil (db=Coil db_id=coil from=336 to=357 evalue=NA)
coiled-coil (db=Coil db_id=coil from=112 to=133 evalue=NA)
ACD28_102_23
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

23088..24815
DNA (1728bp) protein (576aa)
seg (db=Seg db_id=seg from=77 to=88)
seg (db=Seg db_id=seg from=501 to=513)
seg (db=Seg db_id=seg from=535 to=549)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD28_102_24
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

24836..26236
DNA (1401bp) protein (467aa)
seg (db=Seg db_id=seg from=233 to=244)
seg (db=Seg db_id=seg from=427 to=440)
CARDB (db=HMMPfam db_id=PF07705 from=164 to=245 evalue=1.8e-05 interpro_id=IPR011635 interpro_description=APHP)
CARDB (db=HMMPfam db_id=PF07705 from=28 to=129 evalue=3.0e-05 interpro_id=IPR011635 interpro_description=APHP)
ACD28_102_25
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

26200..27060
DNA (861bp) protein (287aa)
seg (db=Seg db_id=seg from=67 to=82)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_102_26
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

27323..27808
DNA (486bp) protein (162aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=117 to=130)
seg (db=Seg db_id=seg from=146 to=160)
ACD28_102_27

Not on your lists

27893..28108
DNA (216bp) protein (72aa)
Transposase_17 (db=HMMPfam db_id=PF01797 from=16 to=61 evalue=2.7e-12 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Transposase IS200-like (db=superfamily db_id=SSF143422 from=16 to=64 evalue=6.7e-10)
Uncharacterized protein {ECO:0000313|EMBL:EKD93503.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 27 items

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