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RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18

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Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_1
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(161..3400)
-----------------
DNA (3240bp)
protein (1080aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CW04_9BACT
lipoprotein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
lipoprotein
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_2
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3710..4282)
-----------------
DNA (573bp)
protein (191aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_3
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4720..4977)
-----------------
DNA (258bp)
protein (86aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_4
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5010..5351)
-----------------
DNA (342bp)
protein (114aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5607..9275)
-----------------
DNA (3669bp)
protein (1223aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036717E3
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_6
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10165..11142)
-----------------
DNA (978bp)
protein (326aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037BB0F5
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_7
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11261..11821)
-----------------
DNA (561bp)
protein (187aa)
sigW; RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RNA polymerase, sigma-24 subunit, ECF subfamily id=2110563 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
sigW; RNA polymerase sigma factor SigW
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_8
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

12616..13005
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036FEFF6
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_9
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

13189..14961
-----------------
DNA (1773bp)
protein (591aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5) Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase id=2194024 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15213..15494)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FC07_9BACT
DNA-binding protein (HU-like protein); K03530 DNA-binding protein HU-beta Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
DNA-binding protein, IHF-related
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_11
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15630..15953)
-----------------
DNA (324bp)
protein (108aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000364141D
trxA; thioredoxin; K03671 thioredoxin 1 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
trxA; thioredoxin
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_12
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16110..18173
-----------------
DNA (2064bp)
protein (688aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ATP-dependent DNA helicase RecG id=2193978 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
ATP-dependent DNA helicase RecG
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_13
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

18205..18765
-----------------
DNA (561bp)
protein (187aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_14
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19196..19726)
-----------------
DNA (531bp)
protein (177aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative 3-methyladenine DNA glycosylase n=1 Tax=uncultured bacterium RepID=K2F1Z5_9BACT
DNA-3-methyladenine glycosylase
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_15
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19787..21148)
-----------------
DNA (1362bp)
protein (454aa)
DNA repair protein RadA Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
DNA repair protein radA id=1743847 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DNA repair protein RadA
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_16
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21273..22043)
-----------------
DNA (771bp)
protein (257aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000374D369
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
hypothetical protein
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22085..22738)
-----------------
DNA (654bp)
protein (218aa)
id=1743850 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1743850 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_18
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22949..24859)
-----------------
DNA (1911bp)
protein (637aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Type IV secretory pathway VirB4 protein-like protein id=1743851 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Type IV secretory pathway VirB4 components-like protein
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_19
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24989..25672)
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=1743853 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_20
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(25840..26292)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00035E9C90
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_21
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(26475..28028)
-----------------
DNA (1554bp)
protein (518aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000371E019
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(28100..28804)
-----------------
DNA (705bp)
protein (235aa)
id=1743860 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1743860 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_23
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(28852..31410)
-----------------
DNA (2559bp)
protein (853aa)
coiled-coil 532..563 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
coiled-coil 532..563 id=12944 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_24
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(31427..31912)
-----------------
DNA (486bp)
protein (162aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_25
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(32070..33566)
-----------------
DNA (1497bp)
protein (499aa)
Apolipoprotein N-acyltransferase Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Apolipoprotein N-acyltransferase id=4731967 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_26
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(33559..42114)
-----------------
DNA (8556bp)
protein (2852aa)
Putative lipoprotein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative lipoprotein id=1743869 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_27
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(42202..42789)
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000365C2D0
Peptidoglycan-associated outer membrane protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
peptidoglycan-associated outer membrane protein
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_28
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(42992..43840)
-----------------
DNA (849bp)
protein (283aa)
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
dimethyladenosine transferase (EC:2.1.1.48)
Ribosomal RNA small subunit methyltransferase A id=1743875 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_29
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(43965..44492)
-----------------
DNA (528bp)
protein (176aa)
id=1743879 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1743879 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFOXYB2_FULL_OD1_34_18_rifoxyb2_full_scaffold_18_30
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

44735..45697
-----------------
DNA (963bp)
protein (321aa)
id=1816787 Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
id=1816787 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Displaying items 1-30 of 131 in total

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