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cn_combo_scaffold_3078

Alias: ERY14_43

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3078_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..340
DNA (339bp) protein (113aa)
Rieske (2Fe-2S) protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G932_NOVAD
Rieske (2Fe-2S) protein
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:ABD25641.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
cn_combo_scaffold_3078_2
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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328..933
DNA (606bp) protein (202aa)
TetR family transcriptional regulator n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YY06_9RHOO
TetR family transcriptional regulator {ECO:0000313|EMBL:ENO87282.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera lina
putative TetR family transcriptional regulator
cn_combo_scaffold_3078_3
Elioraea tepidiphila, Elioraea, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1097..1870)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DB36F
cn_combo_scaffold_3078_4
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2423..3577
DNA (1155bp) protein (385aa)
3-oxoacyl-ACP synthase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E0730B
3-oxoacyl-ACP synthase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_5
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3654..4406
DNA (753bp) protein (251aa)
phosphatidylserine decarboxylase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E9286C
phosphatidylserine decarboxylase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_6
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4403..5278
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FC393E
phosphatidylserine synthase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_7
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5208..5480)
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO88462.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_3078_8
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5761..6531
DNA (771bp) protein (257aa)
30S ribosomal protein S2 n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002D7BEC5
30S ribosomal protein S2
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_9
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6654..7580
DNA (927bp) protein (309aa)
Elongation factor Ts n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WA05_9SPHN
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacter
tsf; elongation factor Ts
cn_combo_scaffold_3078_10
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7773..8495
DNA (723bp) protein (241aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WA09_9SPHN
cn_combo_scaffold_3078_11
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8499..9056
DNA (558bp) protein (186aa)
ribosome recycling factor n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030201D8
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=383381 species="Bacteria;
frr; ribosome recycling factor
cn_combo_scaffold_3078_12
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9071..9760
DNA (690bp) protein (230aa)
UDP pyrophosphate synthase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003764FEB
undecaprenyl diphosphate synthase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_13
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9747..10472
DNA (726bp) protein (242aa)
Phosphatidate cytidylyltransferase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAC0_9SPHN
phosphatidate cytidylyltransferase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_14
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10481..11647
DNA (1167bp) protein (389aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002FA2F74
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_3078_15
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11640..12761
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031E20F6
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_16
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12955..15678
DNA (2724bp) protein (908aa)
membrane protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00037FDB1F
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
outer membrane protein
cn_combo_scaffold_3078_17
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15678..16379
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E597B9
Uncharacterized protein {ECO:0000313|EMBL:KEO88474.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
hypothetical protein
cn_combo_scaffold_3078_18
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16426..16899
DNA (474bp) protein (158aa)
3-hydroxyacyl-ACP dehydratase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00031D10DC
(3R)-hydroxymyristoyl-ACP dehydratase
Tax=BJP_IG2102_Porphyrobacter_62_18
cn_combo_scaffold_3078_19
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17187..17411
DNA (225bp) protein (75aa)
50S ribosomal protein L31 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDL5_9SPHN
rpmE; 50S ribosomal protein L31
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
cn_combo_scaffold_3078_20
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17618..18463
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CLV8_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU73254.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
putative IS110 family transposase, IS1111 group
Displaying 20 items

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