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cn_combo_scaffold_1211_2

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 128..793

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase {ECO:0000313|EMBL:AKH43329.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AKH43329.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 222.0
  • Bit_score: 351
  • Evalue 7.00e-94
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 222.0
  • Bit_score: 332
  • Evalue 1.20e-88
Shikimate dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZU84_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 222.0
  • Bit_score: 346
  • Evalue 1.60e-92

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCCGCACAAGCAGGCGGTAATCCCCTTGCTTGATCGCCTTGATCCTCTGGCGACGCGGATCGGTGCCGTGAACACCATCGTGCGGGAGCCTGACGGATCGCTTTCCGGCTACAATACCGATGCTGGCGGGTTCCTTGAACCGCTGCGGCCCGTGCTCGCCAAAGAGCATCTGTTCCGCATGGCGCGAGTGTTGGGTACAGGGGGGGCAGCTCGAGCGATCATCGCCGCATTAGCGCAAGAGCACGTAGTGATCGTCCTGGCCGGCCGCGATCCCGAAAAGGCGCGTGCCCTGCTGGACGAACTGGACCCCAAGGGTGAGCATCATGTTGCTCCGCTTGCCCATTTTGCGGAGCCGACCGATTTCGAGTTTGACGATCGCGCCGGATGCTTCGACCTGGTGGTGAATGCCAGCCCACTGGGCATGGCGGGCCAGCCCCCGCTCGAGTTCGATTTCAGCCATGTGCCCCCCGGCAGCATCATCTACGACATCGTTACTCACCCGGTGGAAACGCCCTTGCTCAAGGCGGCAAGCGCTGCCGGCTATAGGACGGTGGACGGGCTTTCCATGCTGATCGGACAAGCGGCGGTCGCTTTTGAGCGGTTCTTCGCACAGGCCCCTCCGCGCCAATATGACGCCGAGTTGCGGGAGTTGCTGACATCATGA
PROTEIN sequence
Length: 222
MPHKQAVIPLLDRLDPLATRIGAVNTIVREPDGSLSGYNTDAGGFLEPLRPVLAKEHLFRMARVLGTGGAARAIIAALAQEHVVIVLAGRDPEKARALLDELDPKGEHHVAPLAHFAEPTDFEFDDRAGCFDLVVNASPLGMAGQPPLEFDFSHVPPGSIIYDIVTHPVETPLLKAASAAGYRTVDGLSMLIGQAAVAFERFFAQAPPRQYDAELRELLTS*