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cn_combo_scaffold_2230_8

Organism: CN-SCN_Erythrobacter_14x

partial RP 39 / 55 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(4616..6667)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000306E85F similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 679.0
  • Bit_score: 1151
  • Evalue 0.0
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 687.0
  • Bit_score: 1078
  • Evalue 0.0
Tax=BJP_IG2102_Porphyrobacter_62_18 similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 678.0
  • Bit_score: 1154
  • Evalue 0.0

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Taxonomy

BJP_IG2102_Porphyrobacter_62_18 → Porphyrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2052
ATGGCCTCGAGCGCAAACACCCCCGACAAAGATGATGCCCCGCTGATCGACCTCAACGAGGCATCGGTCAAAAAGCTCATCAGCAAGGCGCGCAAGCGCGGCTATGTCACCTATGATGAATTGAACGAGGCGCTTCCTTCAGGAGAGATGAGCCCCGATCAGATCGAGGACATCCAGACCGCGCTTTCCGAAATGGGCGTGCAGATCGTCGAGACCGATGAAGACGCCGAGGCTGAGGCCGACGAGGACGGCGATGAGGTTGCAGCTGTCGGCAGCGATGACGACGACGAAGACAGCGATGACGACGAGGGCGATAAAAAGCCCGGCGTAAAGGATGCCCGCGCGGCCAATCGCAAGACCGCAACCGGCGACCGCACCGATGACCCAGTGCGCATGTATCTGCGCGAAATGGGCGCGGTGGAACTCCTCAGCCGCGAAGGCGAAATCGCCATTGCCAAGCGGATCGAGGCAGGCCGCGACATGATGATCATGGGGCTGTGCGAAAGCCCGATCACTTTCCACGCCATCATTCAGTGGTCAGAAGCGCTCAACGCAGGCGATATGCAGCTGCGCGAGATTCTCGATCTTGATGCCATGCTGTCGAAGGAACCGCCGGCCGACAAGATGGCCGATGATGCCGAAGACGACGACGGCGAAATCTCGGAAGAAACCGCTGGCCCCACAATCCGTGAGGACGACGAGGAAGAAGACGAGGCCGAAACCAGCGAGGACGAGGACGAGGACGGCACCCCGCGCCGCCGTGAAGAGGACGACGAGGAAGACAACACCTTGTCGCTTGCCCAGATGGAAGCGGCGCTCAAGCCCGAGGCCCTGGAACGTTTCGCCCGGATCACCACGCTTTTCAATGAATTCGAGAAGTTGCAAGGTGAGCGGGTCGACACTTTGGCGGCGGGCAATGAGTTCCCGGCAGCCAAGGAAAAGAAATACGAACAATTGCGCGAAGATCTCACCGCCGAGGTGGAAAGCGTGCAGTTTCACGCGACCAAGATCGAATTTCTGGTCGACAATCTCTACGCCTTCAACCGCCGCTTGACGACGCTAGGCGGGCAGATGCTGCGCCTGGCCGAACGCCATAAGATCAAGCGCGCCGATTTCCTTGCTGCCTATGTCGGCAATGAAATGGACGATGCGTGGATTGCTGAAAAGGCCAAGAAGGACAAGAAGTGGGCGGCTTTTGCCGAGCGCGAAGCTGCGGCCGCTGAACGGATCCGTTCCGAAATCGCTGATATTGCCGCACAGACCGGCATGAGCCTTGGCGAGTTCCGCCGCATCGTCAACATGGTGCAAAAAGGCGAGCGCGAGGCGCGCATCGCCAAAAAGGAAATGGTCGAGGCGAATCTACGTCTGGTGATCTCGATTGCCAAGAAATACACCAATCGGGGCTTGCAATTCCTTGATCTTATTCAGGAAGGCAATATCGGGTTGATGAAGGCGGTCGACAAGTTCGAATATCGCCGCGGCTACAAGTTCTCAACTTACGCGACGTGGTGGATCCGGCAGGCGATCACGCGGAGCATCGCGGATCAGGCGCGCACCATCCGCATTCCGGTGCACATGATTGAGACGATCAACAAGCTGGTGCGCACCAGCCGTCAGTTCCTCCACGAGGAAGGCCGCGAGCCGACGCCTGAGGAAATGGCTGCGCGCCTCTCCATGCCGCTCGAAAAGGTGCGCAAGGTGATGAAAATCGCCAAGGAGCCGATCAGCCTTGAAACCCCGATCGGGGATGAGGAAGACTCGCATCTCGGCGATTTCATCGAGGACAAGAACGCGATCATCCCGGTGGATGCCGCCATTCAGGCGAACCTCAAGGAAACTGTCACCCGCGTGCTCGCCAGTCTTACCCCGCGTGAGGAACGCGTTTTGCGGATGCGTTTCGGCATTGGGATGAACACGGATCACACGCTGGAAGAAGTCGGCCAGCAATTCAGCGTGACGCGCGAACGCATCCGCCAGATTGAGGCGAAGGCTTTGCGGAAGCTCAAGCACCCCTCGCGCTCCCGCAAAATGCGCAGCTTCCTTGATCAATAA
PROTEIN sequence
Length: 684
MASSANTPDKDDAPLIDLNEASVKKLISKARKRGYVTYDELNEALPSGEMSPDQIEDIQTALSEMGVQIVETDEDAEAEADEDGDEVAAVGSDDDDEDSDDDEGDKKPGVKDARAANRKTATGDRTDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRDMMIMGLCESPITFHAIIQWSEALNAGDMQLREILDLDAMLSKEPPADKMADDAEDDDGEISEETAGPTIREDDEEEDEAETSEDEDEDGTPRRREEDDEEDNTLSLAQMEAALKPEALERFARITTLFNEFEKLQGERVDTLAAGNEFPAAKEKKYEQLREDLTAEVESVQFHATKIEFLVDNLYAFNRRLTTLGGQMLRLAERHKIKRADFLAAYVGNEMDDAWIAEKAKKDKKWAAFAEREAAAAERIRSEIADIAAQTGMSLGEFRRIVNMVQKGEREARIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHEEGREPTPEEMAARLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAIIPVDAAIQANLKETVTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKMRSFLDQ*