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scnpilot_expt_750_bf_scaffold_1586_9

Organism: SCNpilot_expt_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Location: 5686..6270

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8X7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 179.0
  • Bit_score: 171
  • Evalue 6.20e-40
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 191
  • Evalue 1.10e-45
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 179.0
  • Bit_score: 171
  • Evalue 1.70e-40

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAAGGATGTATTGCACATAAAGTGGTTGCTTGATCAGGTAGCTCTTCATCAAAGCGAAGAAGCCTATAAAAAATTATTCCTGCTTCTTCATAAACCCCTTTGCCAGTTTGCCTTCGGAATTCTTAAATCCAATGACCATGCACAGGAAGTAGTTTCCGACGTGTTCATTCATATATGGGAGAAAAAAGAAAAACTTCCCCCCATTGAATCTCCCCTGGTCTATCTGTATAAGGCTGTGAAAAACAGAGCCTTGAATAGTATCGCCAAAGAGCGGCGCCAGCAAGCCCTTGATTCCAGTGAATGGCTGGTCCCACTACCCAGCGTTTACTTCGATCCGGAAAAACTGATGATGACGGAGGAGCTGATGCAAAAACTCCAGCTGGCTATAGAAGACCTGCCCAGCCGCTGCCGGCTCATCTTCAAACTGGTAAAAGATGATGGATTGAAATATAAAGAAGTGGCTGAGCTGTTGCAGATTTCTGTGAAAACCGTTGAGGCTCAGATGACCATCGCCATGCGGCGATTGGGAAAATGTATGCAGTTGGAAGTGTTCCGTCAGGAACCCAGGCCTTCCAAAAAATAA
PROTEIN sequence
Length: 195
MKDVLHIKWLLDQVALHQSEEAYKKLFLLLHKPLCQFAFGILKSNDHAQEVVSDVFIHIWEKKEKLPPIESPLVYLYKAVKNRALNSIAKERRQQALDSSEWLVPLPSVYFDPEKLMMTEELMQKLQLAIEDLPSRCRLIFKLVKDDGLKYKEVAELLQISVKTVEAQMTIAMRRLGKCMQLEVFRQEPRPSKK*