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SCNpilot_expt_750_bf_UNK

In projects: SCNPILOT_EXPT_750_BF

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 8.95 Longest contig: 69.54 Kbp Bin length: 57.41 Mbp GC content: 55.10 %
Contigs count: 27580 Features count: 77384 rRNAs count: 26 tRNAs count: 617

Genome completeness

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 17
Displaying items 27151-27200 of 27580 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_expt_750_bf_scaffold_29351
Species: Enterococcus faecium (50%)
2 1122 bp 29.14 3.12 100.80
scnpilot_expt_750_bf_scaffold_8940
Species: Rhizobium sp. CF142 (50%)
2 2613 bp 61.92 3.83 100.80
scnpilot_expt_750_bf_scaffold_5888
Species: Devosia geojensis (50%)
4 3476 bp 67.12 4.53 100.81
scnpilot_expt_750_bf_scaffold_21636
Order: Rhizobiales (100%)
5 2101 bp 63.16 5.83 100.81
scnpilot_expt_750_bf_scaffold_7925
Species: Pontibacter korlensis (50%)
4 2839 bp 44.45 3.96 100.81
scnpilot_expt_750_bf_scaffold_12631
Species: Dyadobacter fermentans (100%)
3 2065 bp 51.62 3.15 100.82
scnpilot_expt_750_bf_scaffold_23493
Species: Shinella sp. DD12 (66.67%)
3 1336 bp 67.14 3.74 100.82
scnpilot_expt_750_bf_scaffold_26768
Species: Burkholderia cenocepacia (100%)
2 1214 bp 64.42 4.53 100.82
scnpilot_expt_750_bf_scaffold_26854
Species: bacterium YEK0313 (50%)
2 1211 bp 60.53 3.10 100.83
scnpilot_expt_750_bf_scaffold_23658
Species: Bosea sp. LC85 (100%)
3 1330 bp 66.92 3.95 100.83
scnpilot_expt_750_bf_scaffold_11765
Species: Sphingobacterium spiritivorum (100%)
2 2166 bp 44.74 3.69 100.83
scnpilot_expt_750_bf_scaffold_21146
Species: Methyloversatilis universalis (50%)
2 1443 bp 68.75 2.95 100.83
scnpilot_expt_750_bf_scaffold_23936 2 1318 bp 57.59 1.90 100.84
scnpilot_expt_750_bf_scaffold_7825
Species: Acetobacter orleanensis (66.67%)
3 2865 bp 55.29 2.88 100.84
scnpilot_expt_750_bf_scaffold_27388
Species: Pseudomonas aeruginosa (75%)
4 1193 bp 71.75 429.59 100.84
scnpilot_expt_750_bf_scaffold_27399
Species: Candidatus Caedibacter acanthamoebae (100%)
2 1193 bp 40.91 2.72 100.84
scnpilot_expt_750_bf_scaffold_26348
Order: Pseudonocardiales (50%)
4 2026 bp 65.00 3.33 100.84
scnpilot_expt_750_bf_scaffold_24168
Species: Dyadobacter fermentans (100%)
2 1309 bp 49.05 4.20 100.84
scnpilot_expt_750_bf_scaffold_8920
Genus: Flavobacterium (66.67%)
3 2615 bp 35.56 3.92 100.84
scnpilot_expt_750_bf_scaffold_27638
Species: Oleiagrimonas soli (50%)
2 1184 bp 66.39 4.43 100.85
scnpilot_expt_750_bf_scaffold_24401
Species: Dyadobacter fermentans (100%)
2 1300 bp 47.23 3.08 100.85
scnpilot_expt_750_bf_scaffold_27807
Species: Flavobacterium sp. AED (50%)
2 1178 bp 32.00 3.82 100.85
scnpilot_expt_750_bf_scaffold_26695
Species: Pedobacter antarcticus (100%)
3 2234 bp 53.72 3.02 100.85
scnpilot_expt_750_bf_scaffold_31280
Species: Paracoccus sp. 5503 (50%)
2 1050 bp 58.19 3.57 100.86
scnpilot_expt_750_bf_scaffold_17554
Genus: Sphingobium (50%)
4 1633 bp 59.58 3.52 100.86
scnpilot_expt_750_bf_scaffold_16031
Species: Dysgonomonas mossii (100%)
3 1743 bp 35.40 2.29 100.86
scnpilot_expt_750_bf_scaffold_8647
Species: Dysgonomonas gadei (50%)
2 2671 bp 46.01 3.84 100.86
scnpilot_expt_750_bf_scaffold_25159
Species: Flavobacterium subsaxonicum (50%)
2 1273 bp 37.08 3.14 100.86
scnpilot_expt_750_bf_scaffold_14737
Species: Dyadobacter fermentans (100%)
2 1850 bp 54.05 3.78 100.87
scnpilot_expt_750_bf_scaffold_31689
Species: Hyphomicrobium denitrificans (50%)
2 1038 bp 69.85 5.78 100.87
scnpilot_expt_750_bf_scaffold_14801
Order: Rhodocyclales (66.67%)
3 1844 bp 62.31 3.52 100.87
scnpilot_expt_750_bf_scaffold_31850
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
3 1032 bp 63.86 8.72 100.87
scnpilot_expt_750_bf_scaffold_7397
Species: Dysgonomonas mossii (75%)
4 2980 bp 29.87 4.36 100.87
scnpilot_expt_750_bf_scaffold_28939
Species: Dysgonomonas mossii (50%)
2 1139 bp 35.47 2.63 100.88
scnpilot_expt_750_bf_scaffold_28948
Species: Sphingobium sp. SYK-6 (66.67%)
3 1139 bp 65.23 5.93 100.88
scnpilot_expt_750_bf_scaffold_22855
Species: Dyadobacter fermentans (100%)
2 1362 bp 53.01 3.30 100.88
scnpilot_expt_750_bf_scaffold_26036
Species: Burkholderia thailandensis (50%)
2 1240 bp 32.58 2.42 100.89
scnpilot_expt_750_bf_scaffold_23147
Species: Flavobacterium hydatis (50%)
2 1350 bp 34.67 3.70 100.89
scnpilot_expt_750_bf_scaffold_26131
Species: Flavihumibacter solisilvae (50%)
2 1237 bp 48.26 2.63 100.89
scnpilot_expt_750_bf_scaffold_12016
Order: Sphingobacteriales (66.67%)
3 2135 bp 45.48 3.51 100.89
scnpilot_expt_750_bf_scaffold_20865
Species: RLO_Betaproteobacteria_65_14 (50%)
2 1457 bp 66.99 5.15 100.89
scnpilot_expt_750_bf_scaffold_23365
Genus: Flavobacterium (66.67%)
3 1341 bp 41.61 3.91 100.90
scnpilot_expt_750_bf_scaffold_32685
Species: Flavihumibacter solisilvae (50%)
2 1002 bp 48.10 2.99 100.90
scnpilot_expt_750_bf_scaffold_19675
Genus: Arenimonas (66.67%)
3 1986 bp 61.53 4.41 100.91
scnpilot_expt_750_bf_scaffold_40691
Species: Sphingobium sp. SYK-6 (66.67%)
3 1323 bp 63.95 4.16 100.91
scnpilot_expt_750_bf_scaffold_23953
Species: GWF2_Bacteroidetes_33_38_curated (66.67%)
3 1317 bp 41.38 3.80 100.91
scnpilot_expt_750_bf_scaffold_8314
Genus: Flavobacterium (66.67%)
3 2741 bp 37.58 4.01 100.91
scnpilot_expt_750_bf_scaffold_27250
Order: Burkholderiales (66.67%)
3 1198 bp 70.03 4.38 100.92
scnpilot_expt_750_bf_scaffold_21793
Order: Burkholderiales (66.67%)
3 1412 bp 67.78 5.49 100.92
scnpilot_expt_750_bf_scaffold_39342
Domain: Bacteria (66.67%)
3 1510 bp 70.13 3.31 100.93
Displaying items 27151-27200 of 27580 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.