ggKbase home page

scnpilot_expt_750_bf_scaffold_88_18

Organism: SCNPILOT_EXPT_750_BF_Sphingobacteriia_47_330

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 19903..20697

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein LuxR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3I6_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 259.0
  • Bit_score: 295
  • Evalue 5.10e-77
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 259.0
  • Bit_score: 295
  • Evalue 1.40e-77
Regulatory protein LuxR {ECO:0000313|EMBL:ACU03265.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 259.0
  • Bit_score: 295
  • Evalue 7.10e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 795
ATGAGAAAGAGCAAAGATCTCCGGGCACTCACCTACAGTGAACACCTGCAGGAGATTGGTAAGCAGGACAACAAGGTGAATCAACAGGAGATAACCGGGATGATCGATTCCCTTGAACGCCTGGGGAATCATCTTACGCACACTGCTCCCCTTTTATATGCCATAGATTATACTACCGGCCGGTACCTTCTTTTTACCGACGCTATCAGAGGCATACTCAACGAATCGCCCGAAGCTTTTCTGGAAGGAGGTATACCCAAATTGATAGATGTATACCAAAAAGACGACTTCAAAGTATATAACGAGCAGGTCTTTACCAGGAATAAAGAATTTCTTGCTGCGCAACCAGCCAATGAACACCATCGCTATATTTTTTCCTATAATTTCAGAGTTCGGCACCGCAACGGCAGCTATGTACCGATATACCAGCGCGGATTTTATATCAGTTCGCCAGACACCGGGCAGCCTCTTTACAGTCTCGGAATGGTAGTAGACATTTCCCCGTTTAAAAAGGATCAATTAATCTCGCACTCAATAGAGCAGGCTAATCCTGATGGTAACAGGCTCTTACAGCAGCATTATTATTTTCCTAATGAGGAAGACGCGCTGCTTTCTTCCCACGAGCGCCGCATTCTTCAATACATGTCCGAAGGACTCAGCGGTAAACAAATTGCAGACCGGCTGCATATAACGGAAAACACCGTGGCCAATCACCGAAAGAATTTACTGAGAAAAACAAATACAAAAAATATGGCCGAACTCGTGGCATTCGGATGCCGCAGCGGTCTTATATAG
PROTEIN sequence
Length: 265
MRKSKDLRALTYSEHLQEIGKQDNKVNQQEITGMIDSLERLGNHLTHTAPLLYAIDYTTGRYLLFTDAIRGILNESPEAFLEGGIPKLIDVYQKDDFKVYNEQVFTRNKEFLAAQPANEHHRYIFSYNFRVRHRNGSYVPIYQRGFYISSPDTGQPLYSLGMVVDISPFKKDQLISHSIEQANPDGNRLLQQHYYFPNEEDALLSSHERRILQYMSEGLSGKQIADRLHITENTVANHRKNLLRKTNTKNMAELVAFGCRSGLI*