ggKbase home page

scnpilot_expt_750_bf_scaffold_476_29

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(31643..32620)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 318.0
  • Bit_score: 596
  • Evalue 6.30e-168
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 318.0
  • Bit_score: 596
  • Evalue 3.10e-167
ribosomal large subunit pseudouridine synthase D n=1 Tax=Thiobacillus thioparus RepID=UPI000364D88F similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 325.0
  • Bit_score: 650
  • Evalue 9.90e-184
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGGAAAAGACACAGAAAATTTGTCGGACGATTATAAGGGAAATACCGGGGACGGCGTCCGCGAGCTGGTAATCCCCGACGAGCAGGGGGGGCAGCGCCTGGATCAGGCCCTGTCGGCCCTGCTGCCGGAGTTCTCGCGCAACCGCATCCAGAACTGGATCCGTGCGCGCAAGATCGCGGTGGACGACGCCTGGGCCACGACCAAGATGAAAGTCAGCGGCGGCGAATCGGTGCGGGTCGAGGTCGAGCCCGACCCGAATGCCACGCCCGATGCGCCTGAGGCCATCCCGCTTGACGTGGTGTTCGAGGACACCATGCTGATGGTGATCAACAAGCCGGTCGGCCTGGTGGTCCATCCCGGCAGCGGCAATCGCCAGGGCACGCTGCTCAATGCGCTCCTGCATCGCGTGCCGCAGGTGGCTGAACTGCCGCGCGCCGGCATCGTGCACCGGCTCGACAAGGACACCTCGGGCCTGCTGGTTGTCGCCAAAACGCTGAGGGCCCACACCGACCTGGTGCGCCAGCTGCAGGCGCGCACCGTCAAGCGTGAATACCTGGCCCTGGTCTACGGCGAGGTCGACCATGCGGGCACGGTCGACGCCCCGCTGGCGCGCGATCCGCACAACCGCACCAAGCGCACTGTGCACAGCATGGGCAAGGAGGCGGTCACGCACTATGACGTGGTCGAGCGCTTCCCCGGGATCACCCTGCTGCGCTGCAAGCTCGAAACCGGGCGTACCCACCAGATCCGCGTGCACATGCAGCATATCGGCCATCCGCTGGTGGGCGAATCGGTCTACAGCGCCAGCCGCCGCAGCCACCTCAAGATTCCCTTCCCGCGCCAGGCGCTGCACGCGGAAAGACTGGGCCTGATCCATCCGGTCACCCAGGAATTCATGCAATGGGAATGCCCGCTGCCGCCCGACTTCGCCTCGCTGTTGGCGGCGCTGCGGGAAAACACCGACTGGGTCAAGTGA
PROTEIN sequence
Length: 326
MGKDTENLSDDYKGNTGDGVRELVIPDEQGGQRLDQALSALLPEFSRNRIQNWIRARKIAVDDAWATTKMKVSGGESVRVEVEPDPNATPDAPEAIPLDVVFEDTMLMVINKPVGLVVHPGSGNRQGTLLNALLHRVPQVAELPRAGIVHRLDKDTSGLLVVAKTLRAHTDLVRQLQARTVKREYLALVYGEVDHAGTVDAPLARDPHNRTKRTVHSMGKEAVTHYDVVERFPGITLLRCKLETGRTHQIRVHMQHIGHPLVGESVYSASRRSHLKIPFPRQALHAERLGLIHPVTQEFMQWECPLPPDFASLLAALRENTDWVK*