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scnpilot_expt_750_bf_scaffold_1354_6

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(2558..3244)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein F n=1 Tax=Thiobacillus thioparus RepID=UPI00037135CB similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 227.0
  • Bit_score: 433
  • Evalue 1.00e-118
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 227.0
  • Bit_score: 438
  • Evalue 7.60e-120
type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 228.0
  • Bit_score: 414
  • Evalue 1.80e-113

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
GTGGTGGCGTTTGTCATCACGGCCATCATCATGATTTTCGTGATTCCCGCGTTCAAGGAACTGTTCAGCAGCTTTGGTGCAGATCTGCCGGGGCCGACCTTGGTGGTTATGGCGATATCGGATTATTTCGTCAAATGGTGGTGGGCGATTTTTGGTGGGATCGGCGGTGGACTGTATGCTTTTTTCCAGGCTTGGAGGCGTTCGCGCAAGGTACAGATGTTCATGGATCGCCTTGTACTCAAGCTGCCGATTTTCGGACCGGTCATCGAGAAGGCCACCATCGCGCGCTGGACGCGCACGCTGGCAACCATGTTTGCGGCGGGCGTGCCGCTGGTTGAAGCCTTGGAATCGGTCGGTGGCGCGTCGGGTAACCAGGTATTCGTTGAGGCCACCCATAAAATCCGCGGCGAAGTGGCGACCGGCACGGCATTGACCGTGGCGATGCAGAATTCCGGACGTTTCCCCAACATGGTGCTACAGATGGCAGCCATCGGCGAGGAATCCGGCTCGCTCGATTCCATGCTGGGCAAGGTGGCCGATTTTTACGAAGCCGAGGTCGACGACGCGGTCGAAGCGCTGTCGAGCCTGATGGAGCCGATCATCATGGTGGTGCTGGGTACCCTTATCGGTGGCATGGTGATCGCCATGTACCTGCCGATCTTCAAGATGGGCCAGGTTGTAGGGTGA
PROTEIN sequence
Length: 229
VVAFVITAIIMIFVIPAFKELFSSFGADLPGPTLVVMAISDYFVKWWWAIFGGIGGGLYAFFQAWRRSRKVQMFMDRLVLKLPIFGPVIEKATIARWTRTLATMFAAGVPLVEALESVGGASGNQVFVEATHKIRGEVATGTALTVAMQNSGRFPNMVLQMAAIGEESGSLDSMLGKVADFYEAEVDDAVEALSSLMEPIIMVVLGTLIGGMVIAMYLPIFKMGQVVG*