ggKbase home page

scnpilot_expt_750_bf_scaffold_1637_4

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(4424..5134)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003664409 similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 236.0
  • Bit_score: 419
  • Evalue 2.70e-114
  • rbh
LamB/YcsF family protein; K07160 UPF0271 protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 235.0
  • Bit_score: 346
  • Evalue 4.10e-92
LamB/YcsF family protein similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 236.0
  • Bit_score: 296
  • Evalue 5.70e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGATCGAGTTGAATGCAGATATCGGCGAGGGCTGCGATGACGGCGCACTGATGCCGTATCTGTCGCGCGTGTCCATCGCCTGCGGTGGGCACACCGGCGATGCCGTGAGCATGACGGCAGCATTGCGGCTGGCGGTCGAGCATGGCGTAGCGGTAGGCGCACACCCGAGCTATCCGGACCGCATCGGATTTGGCCGCCGCGCGTTGGCCGCTTCCGCGGAAGATATTGCGGCTTGGGTTACGCAGCAGACGGAAGCGCTGGCCGAACAGGCCGCACGGTTGGGCTTGCGGTTGGTGCATGTGAAGCCGCATGGTGCGCTCTACAATGTGGCGGCTCAGGACCGCAATGTGGCCCAGGCCATTGTGCAGGCGGTCACGGCATTCGACCCCGGTCTGACACTGGTCGGGTTGGCAGAGTCGCAATTGGTCGCTGCCGGTCGGGCGGCTGGACTGATGGTATTGAATGAAGCGTTTGCCGATCGCCGCTACCAATCCAATGGCCGGCTTGTTTCACGTGAAACCGAAGGCGCATTGGTGGCCGACCCCGACGGCGCGGCACAGCAGGCGCGCGCACTTGCGCAGGGTGGGGAAGTTACCGCGCTGGATGGCACGCCCCTCCGGATTCGGGCCGAAACCCTCTGCCTGCACAGTGACACCCCCCATGCATTAAATATTGCGCGAGCCGTCCATGCGGCCCTCAATCGCGGATAA
PROTEIN sequence
Length: 237
MIELNADIGEGCDDGALMPYLSRVSIACGGHTGDAVSMTAALRLAVEHGVAVGAHPSYPDRIGFGRRALAASAEDIAAWVTQQTEALAEQAARLGLRLVHVKPHGALYNVAAQDRNVAQAIVQAVTAFDPGLTLVGLAESQLVAAGRAAGLMVLNEAFADRRYQSNGRLVSRETEGALVADPDGAAQQARALAQGGEVTALDGTPLRIRAETLCLHSDTPHALNIARAVHAALNRG*