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scnpilot_expt_750_bf_scaffold_1637_14

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(12903..14186)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 446.0
  • Bit_score: 724
  • Evalue 7.70e-206
tRNA modification GTPase MnmE id=1307773 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 447.0
  • Bit_score: 725
  • Evalue 4.20e-206
tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 446.0
  • Bit_score: 659
  • Evalue 7.90e-187

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
GTGGCAAGCCCGCCTCCGGCAAAGCCTGATTTGATTGCAGCCATCGCCACCGCTCCCGGACGCGGTGGCGTGGGTGTGGTACGGGTATCAGGGGCGGATATCGTCCCGCTTGCCCAAGCCATGCTTGGGCGCGTGCCCGCGCCGCGCCATGCGACGTTCTGTCGCTTTCTCGATCGCGATGGCGAAGCCCTCGACGAGGGGATCGCTCTCCATTTTGTCGCCCCCCATTCGTTTACCGGCGAGCACGTGCTGGAACTGCAAGGCCACGGCGGACCGGTGGTGTTGAACCTGATCCTGCAACGTTGTCTGGAACTCGGTGCGCGGCTGGCCGAGCCGGGTGAGTTCTCCCGTCGCGCCTTTCTGAACGGCAGGCTCGATCTGACCCAGGCCGAGGCGGTGGCCGATCTGATCGACGCGGCTTCCACCGAGGCGGCGCGCTCGGCGGTGCGTTCGCTGGCAGGTGCCTTCTCGGCGCGGATCGGGGAACTGGTCGACGCGCTGACGCGTCTGCGCATGTTGGTCGAGGCCACGCTCGACTTTCCCGAAGAGGAGATCGATTTTCTCAAACAGGCCGACGCCTTCGGGCGCCTCGATGCGATTGACGCCAGTCTGGCTGCGGTGCGATCGCAGGCAAAACAAGGCGCGCTGCTGCGCGAAGGTTTGACCGTGGTGCTGATCGGCCAGCCGAACGTGGGCAAGTCGAGTTTGCTGAATCAACTGGCCGGATTCGAGGCCGCGATCGTCACCGAGATCGCGGGCACCACGCGCGATACCGTACGCGAGGCGATCCAGATTGAAGGCGTACCGTTGCACATCGTCGATACCGCAGGCCTGCGTGAGACCAACGACACGGTGGAGAGGCTCGGCATCGCCCGCACCTGGGAGGCGGCGGAGAGGGCCGACGTGGCGTTGCTGCTGGTGGACGCGGCACATGGCCTCAGCGAACGCGAGGCGGCGATCCTGGCGCGCCTGCCGCCAGGGGTGCGGCTCACGATCCACAACAAGATCGATGTCACCGGCGAAGCGCCACGCGTGGCAGGCGACGAGGTCTGGCTTTCCGCCCGGACCGGTGCCGGGATCGATCTCCTGCGCGCCGCGCGTCATCTGGATGCGCTGGGGCGTGCCGCCGGCCATCTTGCCGTTGCGCGTGAATCGACCGGCCAGCTGGAATTGTTTGCCGAAGAACTGCGGCTGGCGCAGGCTGCCTTGTCGGAAATCACCGGCGAGTTTACGGCTGACGATCTGTTGGGTGAGATTTTCAGTTCGTTCTGCATCGGAAAGTAA
PROTEIN sequence
Length: 428
VASPPPAKPDLIAAIATAPGRGGVGVVRVSGADIVPLAQAMLGRVPAPRHATFCRFLDRDGEALDEGIALHFVAPHSFTGEHVLELQGHGGPVVLNLILQRCLELGARLAEPGEFSRRAFLNGRLDLTQAEAVADLIDAASTEAARSAVRSLAGAFSARIGELVDALTRLRMLVEATLDFPEEEIDFLKQADAFGRLDAIDASLAAVRSQAKQGALLREGLTVVLIGQPNVGKSSLLNQLAGFEAAIVTEIAGTTRDTVREAIQIEGVPLHIVDTAGLRETNDTVERLGIARTWEAAERADVALLLVDAAHGLSEREAAILARLPPGVRLTIHNKIDVTGEAPRVAGDEVWLSARTGAGIDLLRAARHLDALGRAAGHLAVARESTGQLELFAEELRLAQAALSEITGEFTADDLLGEIFSSFCIGK*