ggKbase home page

scnpilot_expt_750_bf_scaffold_1721_8

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(7638..8798)

Top 3 Functional Annotations

Value Algorithm Source
heavy metal efflux system protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=RBG_16_Gallionellales_56_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 386.0
  • Bit_score: 246
  • Evalue 5.50e-62
heavy metal efflux system protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB id=12493238 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 384.0
  • Bit_score: 242
  • Evalue 7.40e-61
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 383.0
  • Bit_score: 154
  • Evalue 5.70e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gallionellales_56_9_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGGATCTGGTTGCGGTGAAAAACGCGGACGGCAGCAGCGCGAGCCAGATTCACGTCGATACGGCCACGCAGCAGAAACTCGGCGTGCAACTCGCCGCCGCCGTACCGGCAGTCCTTGCGCACGATATCTCCACCTATGGAACCCTGGTTCCGGACGAAGACGCGGTCTTGCGCATTACACCCAATGTGGGTGGGTTGTTGACTAGGCTGAATGTGCGCCGCATCGGGCAGCGCATCGCCCGTGGCGAGATCCTGTACGAGGTCAGTTCGCCGGATGCACTCAATCTGCAGTACGAATATGTCGACATCCTGCGCCGTGGCGAGCCCACTCTCAAAATGGCGAGGGAACGTCGCGCGCAGAACCGGCTCAAGTTGGAGCAGGCGCATGCACTCGAGCCGTCCGCTCGCGAGCGGGTCGAACGCGAAGTCAGTCAGAGCGAGGAACAGCTCTGGTCGCTCCTGCAGCCTTGGGAGCGCGATCGCGAACGTCTGAAGCTGCGCCTGCAGCAGATCGGACTGACCGACGGGATGCTGGCGCAGCTCACGCGCACGGAGAAAGCCTTTCTAGCCGTGCCGGTGCGTGCGCCGCGCGCCTGCGTGGTGCAGAACATACTGGGACGGCCGGGCATGACGGTGGCGCCCATGACCGAAATTCTGGATTGCGTCGATGCATCGCACGCCCAGATCGAGATCGTGCTCTATCCCGACCAGCTTTCGTGGGTGAAGACGGGTGACGGCGTGAGCATGGTATTCGACGACGGCGACACGGTCACGGCGCGATTGAGCGGACTCAATCCGCTGGTGGACGACGCCACGCGTACGCTGCGGGTGCGCATGCCGGTAGACCTGAAACGCGCGCCGAATCTGGGCGAATACGCGAAGGTGACCATCCATGCCCTGCCGCGCCACGTCCTGGCCGTTCCGAAAACTGCCGTGATGCGGACCGGGCACGGCGATTTCGTGATGCGCGCGATGGGCAGGGGACACTTCATGGCGACCCGGGTGGTGCTCGGGATCGAGGACACGGACCGCATCGCCATCCGCGACGGACTTGCGGACGGTGACCAGGTGGCAGTCAACGGCCAGTTCCTGATGGACGCTGCCGCGTCGATCGCCGACTCCGTGCAGCGCATGCATGCTCCCGCGGCACCGGCACGCTGA
PROTEIN sequence
Length: 387
MDLVAVKNADGSSASQIHVDTATQQKLGVQLAAAVPAVLAHDISTYGTLVPDEDAVLRITPNVGGLLTRLNVRRIGQRIARGEILYEVSSPDALNLQYEYVDILRRGEPTLKMARERRAQNRLKLEQAHALEPSARERVEREVSQSEEQLWSLLQPWERDRERLKLRLQQIGLTDGMLAQLTRTEKAFLAVPVRAPRACVVQNILGRPGMTVAPMTEILDCVDASHAQIEIVLYPDQLSWVKTGDGVSMVFDDGDTVTARLSGLNPLVDDATRTLRVRMPVDLKRAPNLGEYAKVTIHALPRHVLAVPKTAVMRTGHGDFVMRAMGRGHFMATRVVLGIEDTDRIAIRDGLADGDQVAVNGQFLMDAAASIADSVQRMHAPAAPAR*