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scnpilot_expt_750_bf_scaffold_1824_15

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(11288..12508)

Top 3 Functional Annotations

Value Algorithm Source
ispG, gcpE; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 404.0
  • Bit_score: 753
  • Evalue 1.90e-214
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 405.0
  • Bit_score: 741
  • Evalue 1.50e-211
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00038079C3 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 406.0
  • Bit_score: 767
  • Evalue 9.10e-219
  • rbh

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGTCCCAGATTATCCGTCGTCCCACCCGTCAGGTGCAGATCGGCCAAGTGCGGGTCGGCGGTGACGCCCCCGTGGTGGTGCAGTCGATGACCAACACCGACACCGTCGATATCACTGCGACCGTGTGTCAGGTGCAGGCGCTCGCCGAGGCTGGATCGGAACTGGTGCGGCTGACCGTCAACACGCTGGACGCCGCCGCTGCGGTGCCGCGCATTCGTGAGCGACTCGATGTGCTGGGCTGTCGCGTGCCGCTGATCGGCGATTTCCATTTCAACGGCCACAAGCTCTTGACCCAGGTGCCCGAGTGCGCGGAGGCGCTGGCCAAGCTGCGCATCAATCCCGGCAACATCGGACGCGGCAACAAGCGCGACGAGCAGTTCGCCACGCTGATCGAGGTGGCATGCCGCTACGACAAGCCGGTGCGCATCGGCGTCAACTGGGGCAGCCTCGACCAGGCGCTGGCAGCGCGCATGATGGACGACAATGCCCGGCTTGCGCAGCCGGAAGACGCCGAGGTCGTGATGCGGCGCGCGATGGTCGCATCTGCGCTCGAGTCGGCCAGGAAAGCCGAGGAACTGGGACTCGGTGGCGACAAGATCATCCTGTCGTGCAAGATGAGTCGGGTACAGGATCTCATTTCGGTCTACCGTGATCTGGCGTCGCAGTGCGACTACCCGCTGCATCTGGGGTTGACCGAGGCAGGCATGGGCAGCAAGGGCATCGTCGCCTCGACTGCCGCCTTGTCCGTGCTGCTGCAGGAAGGCATCGGCGATACCATCCGGATTTCGCTGACGCCTGAGCCGGGTGGCGAGCGTACCCAGGAAGTCCGTGTCGGCCAGGAAATCCTCCAGGCGCTGGGCTTACGTGCATTCACACCCCAGGTCACGGCCTGTCCTGGCTGCGGCCGCACCACTTCCACCGTGTTCCAGGAACTGGCGCAGGATATCGAAACCTATTTGCGTACCCAGATGCCCGTGTGGCGCAGCCAGTATCCCGGCGTCGAATCCATGCAGGTCGCGGTGATGGGCTGCGTGGTCAACGGCCCTGGCGAGTCCAAGCATGCCAATATCGGCATCTCGCTGCCCGGTACGGGCGAAGTGCCGGTCGCGCCGGTATACGTCGATGGCGAAAAAACCGTGACGCTAAAAGGCGAGAAGATAGCCGAAGAATTCCAGACCATCGTCGAAGACTATGTGCGCAGCCATTACGGCACTGCGTGA
PROTEIN sequence
Length: 407
MSQIIRRPTRQVQIGQVRVGGDAPVVVQSMTNTDTVDITATVCQVQALAEAGSELVRLTVNTLDAAAAVPRIRERLDVLGCRVPLIGDFHFNGHKLLTQVPECAEALAKLRINPGNIGRGNKRDEQFATLIEVACRYDKPVRIGVNWGSLDQALAARMMDDNARLAQPEDAEVVMRRAMVASALESARKAEELGLGGDKIILSCKMSRVQDLISVYRDLASQCDYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGERTQEVRVGQEILQALGLRAFTPQVTACPGCGRTTSTVFQELAQDIETYLRTQMPVWRSQYPGVESMQVAVMGCVVNGPGESKHANIGISLPGTGEVPVAPVYVDGEKTVTLKGEKIAEEFQTIVEDYVRSHYGTA*