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scnpilot_expt_750_bf_scaffold_1973_4

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(2269..3456)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 419.0
  • Bit_score: 706
  • Evalue 2.60e-200
transcription termination factor Rho n=1 Tax=Thiobacillus thioparus RepID=UPI00037BECBE similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 419.0
  • Bit_score: 718
  • Evalue 4.70e-204
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 419.0
  • Bit_score: 706
  • Evalue 5.20e-201

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGCATCTTTCCGAACTCAAGCAGAAACCCATTACCGAGCTTCTCGAGCTTGCCGCCGCCAACGGTATCGACAACGCCAACCGTTTTCGCAAGCAGGAACTGATCTTCACCATCCTGAAAACCCTGGCCAAGCGCGGCGAGAGCATCTACGGCGACGGTGTGCTGGAAGTGCTGCCGGACGGTTTCGGGTTCCTGAGATCGCCGGAGTCCTCGTACCTCGCCAACACCGACGACATCTACGTGTCGCCGTCGCAGATCCGCCGCTTCAACCTGCATACCGGCGACAAGATCGAAGGCGAGATCCGTACGCCGAAGGACGGCGAGCGCTATTCGGCGATGACCAAGCTTGACCTGATCAACGGCGAGCCGCCCGAAGCCAGCAAGAACAAGATCCTGTTCGAGAACCTGACGCCGCTGCACCCGGACAAGCCGCTCAAGCTGGAGCGCGACATCAAGGCCGAGGAAAACATCACCAGCCGCGTGATCGACATCGTCGCGCCGATCGGCAAGGGCCAGCGCGGCCTCCTGGTGGCGCCGCCGAAATCCGGCAAGACGGTGATGCTGCAGCACATCGCGCACGCCATCACGTCCAACCATCCCGACGTGGTCGTGGCATCGACCTTTGACGAACCCGCCAGCCGGCATGTGCAAGTGGCCGAAATGGTGATCGAGCGCGCCAAGCGTCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTCGATTCGATCACCCGTCTGGCCCGTGCTTACAACACCGTGCAGCCGGCCTCCGGCAAGGTACTCACCGGCGGCGTCGACGCCAACGCGTTGCAGAAGCCCAAGCGCTTCTTCGGTGCGGCGCGCAACATCGAGGAAGGCGGCAGCCTTACCATCCTCGCCACCACGCTGGTCGACACCGGCAGCCGCATGGACGACGTGATCTACGAGGAATTCAAGGGTACCGGCAACCTGGAAATCCACCTCGACCGCAAGATGGCCGAGAAGCGCCAGTATCCCGCGATCAACGTCAACCGCTCCGGCACCCGCCGCGAGGAGCTCCTGATGCCGCATGACATCCTGCAAAAGGTGTGGGTGCTCAGGAAGCTGCTGTACCCGATGGACGACATGGAGGCGATGGAATTCCTGCTCGACAAGATCCGTGCGACGAAGAACAACAACGAGTTCTTCGATTCGATGCGGCGCGGCTGA
PROTEIN sequence
Length: 396
MHLSELKQKPITELLELAAANGIDNANRFRKQELIFTILKTLAKRGESIYGDGVLEVLPDGFGFLRSPESSYLANTDDIYVSPSQIRRFNLHTGDKIEGEIRTPKDGERYSAMTKLDLINGEPPEASKNKILFENLTPLHPDKPLKLERDIKAEENITSRVIDIVAPIGKGQRGLLVAPPKSGKTVMLQHIAHAITSNHPDVVVASTFDEPASRHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNTVQPASGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTILATTLVDTGSRMDDVIYEEFKGTGNLEIHLDRKMAEKRQYPAINVNRSGTRREELLMPHDILQKVWVLRKLLYPMDDMEAMEFLLDKIRATKNNNEFFDSMRRG*