ggKbase home page

scnpilot_expt_750_bf_scaffold_2728_7

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_400_partial

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 MC: 3 ASCG 10 / 38
Location: comp(5332..6612)

Top 3 Functional Annotations

Value Algorithm Source
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.5.3) similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 426.0
  • Bit_score: 831
  • Evalue 1.20e-238
NADH-quinone oxidoreductase, chain F {ECO:0000313|EMBL:AAZ97100.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AAZ97100.1};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hy similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 426.0
  • Bit_score: 831
  • Evalue 5.80e-238
NADH dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003611539 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 426.0
  • Bit_score: 859
  • Evalue 1.40e-246
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGAGCCTCTTCACGCCCACCCACCAGGTCTGCAGCTGGACTCAGGCGCTCGACGATCCGGCGTCGCTCGCGACCTATGTCGCCAACGGCGGCTACCAGGCGTTGCGCCGCGTGGTCACCGAGCAGGTATCGGGCGACGCCATCATCGCCGAGCTGAAGACCAGCGCGCTGCGCGGACGAGGCGGCGCGGGCTTTCCGACCGGCCTGAAGTGGAGCTTCATGCCGCGCGCATTCCCGGGCGACAAGTACATCGTGTGCAACAGCGACGAGGGCGAGCCGGGTACGTTCAAGGACCGCGACATCCTGCGCTACAACCCGCACCAGCTGATCGAAGGCATGGCGATCGCCGGCTACGTGCTGGGCGCTAAGGTTGGATACAACTACATCCATGGCGAGATCTTCGAGATCTACGAAATCTTCGAACGTGCGCTGAAGGAGGCGCGCGAGGCCGGCTACCTCGGCGACAATCTGTTCGGTACCGATTTCTGCTTTCAGCTGCATGCACATCATGGCTACGGCGCCTATATCTGCGGCGAGGAAACCGCGCTGCTCGAATCGATCGAGGGCAAGAAAGGACAACCCCGCTTCAAGCCGCCGTTCCCGGCGAGCTTCGGCCTCTACGGCAAGCCGACGACCATCAACAACACCGAGACGCTGGCTTCGGTGCCGTGGATCGTCCAGCATGGCGGCCAGGCTTTTCTGGAACTTGGCAAGCCCAACAACGGTGGGCCCAAGCTTTTTTCAGTCTCGGGCCATGTCAACAAACCCGGCAACTACGAAGTTCCGCTCGGCACGCCGTTTGCCGAATTGCTGGAAATGGCGGGCGGCGTACGGAATGGGCATAAACTGAAAGCCGTCATTCCCGGGGGTTCGTCCGCGCCCGTGTTGCCGGCCGACGTCATGATGGACTGCACGATGGATTTCGATTCCATCGCCAAGGCGGGTTCCATGCTGGGCTCGGGTGCGGTCATCGTGATGGACGAAACGGTGTGCATGGTGCGCGCGCTGGAACGACTGTCCTATTTCTACTTCGAGGAATCCTGCGGCCAATGCACGCCTTGCCGCGAAGGAACCGGCTGGATGTACCGGGTGATCCACCGCATCGAACACGGCCAGGGTCGGCCCGAAGACATGGAATTGCTCAATAGCGTGGCAGGGCGCATCGGTGGCCATACCATCTGCGCCCTGGGCGACGCGGCGGCGATGCCGGTGCAAAGCTTCCTCAAACACTTTGGCCGCGAGTTCGAGCACCACATCGAACACAAGCGATGCATGGTCTGA
PROTEIN sequence
Length: 427
MSLFTPTHQVCSWTQALDDPASLATYVANGGYQALRRVVTEQVSGDAIIAELKTSALRGRGGAGFPTGLKWSFMPRAFPGDKYIVCNSDEGEPGTFKDRDILRYNPHQLIEGMAIAGYVLGAKVGYNYIHGEIFEIYEIFERALKEAREAGYLGDNLFGTDFCFQLHAHHGYGAYICGEETALLESIEGKKGQPRFKPPFPASFGLYGKPTTINNTETLASVPWIVQHGGQAFLELGKPNNGGPKLFSVSGHVNKPGNYEVPLGTPFAELLEMAGGVRNGHKLKAVIPGGSSAPVLPADVMMDCTMDFDSIAKAGSMLGSGAVIVMDETVCMVRALERLSYFYFEESCGQCTPCREGTGWMYRVIHRIEHGQGRPEDMELLNSVAGRIGGHTICALGDAAAMPVQSFLKHFGREFEHHIEHKRCMV*