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scnpilot_expt_750_bf_scaffold_1102_4

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 2888..3817

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC-type transport system, permease component; K01997 branched-chain amino acid transport system permease protein id=12495048 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 310.0
  • Bit_score: 587
  • Evalue 9.80e-165
  • rbh
branched-chain amino acid ABC-type transport system, permease component; K01997 branched-chain amino acid transport system permease protein Tax=CG_Hydro_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 309.0
  • Bit_score: 470
  • Evalue 2.50e-129
branched-chain amino acid ABC-type transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 309.0
  • Bit_score: 435
  • Evalue 1.80e-119

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Taxonomy

CG_Hydro_01 → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGGATATCTTCCTGCAACAACTCATCAACGGCCTGGTGCTCGGCAGCGTGTACGCGCTGGTGGCGCTGGGCTACACCATGGTGTACGGCATCCTCGAACTCATCAATTTCGCCCATGGCGAGATCACCATGATGGGGGCGATGGTGGCGCTGGCCGTGATCGGCGCGCTGGCGCTGGCGGCGCCCGGGCTGCCGGGCGTGCTGGTGCTGGGGGCGGGGCTGGCGGTGGCGATTCCGGTGTGCGTGGCGCTCGGTCTGCTGATCGAGCGCGTCGCCTACCGGCCGCTGCGGCATGCGCCGCGGTTGGCGCCGCTCATCACGGCGATCGGCGTATCGATCATCCTGCAGAACATTGCCATGCTGATCTGGGGCAAGCAGTACATCCCCTTTCCCGCCATCCTGCCGCAGGCACGGCATACGGTTTATGGGGCATCGATCACCAACGTGCAGATTGCCATCCTGCTGCTGGCCACGGGCATCATGCTGACGCTGATTCTGGTGGTCAGGAAAACCCGGCTGGGCCGTGCCATGCGCGCCACCGCACAATCGCGCCAGGTGGCAAGCCTGATGGGCGTGGACGTCAACCGCGTGATCGCCGCCACGTTCGCGATCGGCTCGGCGCTGGCGGCGGTGGCCGGCGTCATGGTCAGCGCGTATTACGGGCTGGCGCACTATTACATGGGTTTCCTGCTCGGCCTCAAGGCCTTCTCGGCAGCCGTATTGGGCGGCATCGGAAATCTGGCGGGGGCGATGCTGGGCGGCCTGCTGCTGGGTCTGATCGAGTCGTTCGGCGCGGGCTATATCGGCGACCTGACCGGAGGGTTCCTCGGCAGCAATTACCAGGACGTGTTCGCCTTCTTCGTGCTGATCACCGTGCTGGTATTCCGCCCTTCCGGCCTGCTGGGCGTGCGGGGAGGCGAGCGTGCCTAG
PROTEIN sequence
Length: 310
MDIFLQQLINGLVLGSVYALVALGYTMVYGILELINFAHGEITMMGAMVALAVIGALALAAPGLPGVLVLGAGLAVAIPVCVALGLLIERVAYRPLRHAPRLAPLITAIGVSIILQNIAMLIWGKQYIPFPAILPQARHTVYGASITNVQIAILLLATGIMLTLILVVRKTRLGRAMRATAQSRQVASLMGVDVNRVIAATFAIGSALAAVAGVMVSAYYGLAHYYMGFLLGLKAFSAAVLGGIGNLAGAMLGGLLLGLIESFGAGYIGDLTGGFLGSNYQDVFAFFVLITVLVFRPSGLLGVRGGERA*