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scnpilot_expt_750_bf_scaffold_985_18

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(19182..20111)

Top 3 Functional Annotations

Value Algorithm Source
RNAse E (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12] id=12493113 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 276.0
  • Bit_score: 543
  • Evalue 1.60e-151
RNAse E (EC:3.1.4.-) similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 276.0
  • Bit_score: 522
  • Evalue 8.40e-146
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=292415 species="Bacteria; Proteobacteria; Bet similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 276.0
  • Bit_score: 522
  • Evalue 4.20e-145

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGAAGCGCATGCTTTTCAACGCAACCCAGGCGGAGGAACTCCGGGTTGCCATCGTCGACGGGCAGAAGCTCGTCGACCTTGACATCGAGTCCGCCAGCAAGGAACAACGCAAGGGCAATATCTACAAGGGTGTCGTCACCCGCGTCGAGCCCAGCCTCGAAGCCGCATTCATCGATTACGGCTGCGAACGCCACGGCTTTTTGCCATTCAAGGAAATCGCCCGTTCCTGCCTGCCCGGCAACGGCAAGGTTCCGGAAAACCTGAAGGAAGGCCAGGAACTCCTGGTTCAGGTGGAAAAGGACGAGCGCGGCAACAAGGGCGCGGCGCTGACCACCTACGTCTCGCTGGCCGGCCGCTACATCGTGCTGATGCCGACCAATCCGCGCGGCGGCGGCGTGTCGCGCCGCATCGAGGGCGAGGAACGCAACGAGCTGCGCGACACCCTGGCGCAACTCGAGATCCCGGAAGGCATGAGCCTGATCGCCCGCACCGCTGGCATCGGCCGCAGCGCCGAGGAGTTCCAGTGGGACCTCAACTACCTGCTGAGCCTGTGGAAGGCCATCGACGGCGCCTCCACCTCGCAGCCCGGCGCCTTCCTGATCTATCAGGAAGGCAGCCTCGTGATCCGCGCCATCCGCGACTATTTCTCGGCCGACATCGGCGAAATCCTGATCGACACCGACGACATCTTCGAACAGGCGCAGCAGTTCATGGCACATGTGATGCCGGACAACGTCAGCAAGGTCAAGCTCTACCGCGACGACGTGCCGCTGTTCTCGCGCTTCCAGATCGAGCACCAGATCGAATCGGCGTTCTCGCGCCAGGCGCCACCAAGGGCAGCGACGTCGAGCAGACCGCCTACAACACCAACCTCGAAGCGGCCGACGAAATCGCCCGCCAGATGCGGCTGCGCGACCTCGGCGGCCTGA
PROTEIN sequence
Length: 310
MKRMLFNATQAEELRVAIVDGQKLVDLDIESASKEQRKGNIYKGVVTRVEPSLEAAFIDYGCERHGFLPFKEIARSCLPGNGKVPENLKEGQELLVQVEKDERGNKGAALTTYVSLAGRYIVLMPTNPRGGGVSRRIEGEERNELRDTLAQLEIPEGMSLIARTAGIGRSAEEFQWDLNYLLSLWKAIDGASTSQPGAFLIYQEGSLVIRAIRDYFSADIGEILIDTDDIFEQAQQFMAHVMPDNVSKVKLYRDDVPLFSRFQIEHQIESAFSRQAPPRAATSSRPPTTPTSKRPTKSPARCGCATSAA*