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scnpilot_expt_750_bf_scaffold_985_19

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 20533..21501

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] id=12493112 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 323.0
  • Bit_score: 629
  • Evalue 1.80e-177
  • rbh
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 322.0
  • Bit_score: 585
  • Evalue 1.10e-164
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenoph similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 322.0
  • Bit_score: 585
  • Evalue 5.50e-164

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGAAAATGAAGGACTTAGAGAAAGATTCGGTCAGGCGCCTGAAGATCGACGATAGCGCGGACAGCCAGCGTCTCGACAACTTTCTGATGGCGCGGCTGAAAGGCGTGCCGAAAAGCCGCATCTACAAGCTGGTGCGGGGCGGTGAGGTACGCATCAACGGCGGCCGCGTCGATGTCGGCTATCGCCTGAAATCGGGCGACGAGGTGCGCATCCCGCCGGTGCGCGTGGCCGTACCCGTGATCACGCCCGCCACCCACCTGCCGCAAGGCGGCATCCGCCTGCTGCCGCACGTCCTCTACCGCGATGACGCGTTGATCGCCTTGAACAAGCCGGCCGGCATGGCGGTACACGGCGGCAGCGGCATTTCGCGCGGGGTGATCGAGCAGATGCGGCTGGAGCTGCCGGAATGCCGCTATATGGAACTGGTACACCGGCTCGACCGCGAGACCTCGGGCGTCCTGCTGATTGCGCTGAAGCGGCGCGCCCTGGTCGGATTGCATGCGGCGATGCGCGACGGCAAGATCGAGAAGTGCTACCTCACGCTGGTGGCCGGACGCTGGCCGAACCCGTTGCAACATGTGAGACTGTCGCTGCACAAACGCGTCACCGATGACGGCGAGAAGCGGGTGACGGTGCGCGACGAAGGCCAGACCGCGCACACGATTTTCCGCCGCCTGCAGGTCTATGCAGACTTTACCCTGCTGGAAGCGGAGCTGAAGACCGGACGCACCCATCAGATCCGCGTGCATACTTCGCACTTGGGCTTTCCGATCGCGGGAGACGACAAATACGGCGATTTCGACCTCAACAAGCGCCTGGCCAAGCAAGGCCTGAAACGCATGTTCCTGCATGCGGCCAAACTGGTATTCGATCATCCCGTCAGCGGCGAACGCCTGACGATCGAGGCGCCGTTACCGGCCGATCTGGCCATTTTTCTGGATAATTTGAAGCATGCCCAAGCAATTTGA
PROTEIN sequence
Length: 323
MKMKDLEKDSVRRLKIDDSADSQRLDNFLMARLKGVPKSRIYKLVRGGEVRINGGRVDVGYRLKSGDEVRIPPVRVAVPVITPATHLPQGGIRLLPHVLYRDDALIALNKPAGMAVHGGSGISRGVIEQMRLELPECRYMELVHRLDRETSGVLLIALKRRALVGLHAAMRDGKIEKCYLTLVAGRWPNPLQHVRLSLHKRVTDDGEKRVTVRDEGQTAHTIFRRLQVYADFTLLEAELKTGRTHQIRVHTSHLGFPIAGDDKYGDFDLNKRLAKQGLKRMFLHAAKLVFDHPVSGERLTIEAPLPADLAIFLDNLKHAQAI*