ggKbase home page

scnpilot_expt_750_bf_scaffold_1280_26

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(25222..27210)

Top 3 Functional Annotations

Value Algorithm Source
SLT domain-containing protein; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] id=12493290 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 663.0
  • Bit_score: 1320
  • Evalue 0.0
  • rbh
SLT domain-containing protein; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 643.0
  • Bit_score: 944
  • Evalue 7.30e-272
SLT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 654.0
  • Bit_score: 930
  • Evalue 2.20e-268

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1989
ATGGCGGCTGCGTGTTACCCTCGTACGATGCTTCGAACCCTTCTTTTTTTCTTGTTGACGGCACTGGCAGCGACGGCCGTCTGGGCGGCGCCAGGCGATGCCGCGGTGAAACAGGCGCAGCAGGCCTATGCAGCGCGCAAGCTCCCGGAACTGGAACGTGCCGCCCGCAAGATTCCGGCCGATCATGTTTTGACGCCCTATGTCGAATACTGGCGTCTGATGCTGGAGCGCCGCACGGACGATGGCCGCATCAAGGACTTTCTGGCCCGCTATCCGGGTAGCCGGCTGGCCGAAATCCTGCGTGCCGACTGGCTGAAATCGCTCGGTGCGCGAGAAGCCTGGCCGGTATTGCTGGCGGAGTATCCGCGACTGGCCAAACCCGATGTGGCGCTTCAATGCTATGCCTATCGCGCGGAATGGGCGCAGGGCAATCGCAGCCATGAGCGCGAGGCGGTGTCCTTGTGGTTCACCGGGCGCGACATGCCGTCGACCTGCACCCCCCTGTTCACACAACTGATCGCAGCCGGCTTGATCGGAGGAGAAGACCTCTGGCGCCGCTTCCGCCTGGCGCTCGAGGCGGGCAATCTCAATGTGGCCAGGGCGGTCGCCACTCTCCTGCCCGAAGCGCAACGCCCGTCCGCAGCCTTGTTGGATCAGGCCGCCCGCGATCCGGCACGCGTGCTGAATGCGGGTGGCCTTGATCCGGCCCGACGCGGCGACCGGGAAATCATGCTCTATGCCTTCGACCAGCTGGCCCGGCGCGACTCGGCCCAGGCGGAGCAGGCGTTGGGCAAGTGGGCATCGCAACTCAACCCGCTGGATTTGCGTGCGGCCTGGGCGCGCCTCGCGACCTGGGCCGCGCGCCGTCATGAAACGGTTGCGCTGGAATGGTTCAAGCAGGCGGGCGATGTGGCCGTCAGCGATTATCAGCGCGAATGGTGGACGCGGGCAGCGCTGCGTGCGGGCGACTGGAAAGCCGCGCAGCAGGCGATGGGAAACATGCGTGACGATGTCCGTGAGCAGCCCGTGTGGCGGTACTGGCGTGCGCGCGCCTTGCAGGCAAGCGGCAAACATCCCGCCGCCAATGCCATTTTTCTGGCGTTGTCGCGTGATTACGGCTACTACAGCCAGTTGGCCCAGGAAGAACTCGGACCCGTCATGCAGGCGCCCGTCGCCAAGGTCAAAACCGGGGGCGACGACGTGGAGGCCATCGCCCGGCAGCCGGGTATCGCGCGCGCCGTCGCGTTGTACGGGCTTGGCTTGCGCGACGATGCCAGACAGGAATGGAACTGGACGATCCGCGATTTCTCCGACCCGCAACTGCTGGCGGCAGCCGAGCTCGCCCGGCGCATGGAATGGTATGACAGCGCCATCAACACGGCTGAACGTACCCGCGAACTGCACGATTTCGAACTGCGTTTCCTGACCCCTTACCGCGAGCTGGCTCGACAGGCCGCGCGGGAAAATGGCATCGATGAAGCCTGGGTGTATGGCCTGATGCGGCAGGAAAGCCGCTTCGTCAACGTCGCGCAGTCGAGCGTCGGCGCCTCCGGCCTGATGCAGATCATGCCGGCGACCGCGCGCTGGATCGCGCAGCGGCTCGGATTCAAGCGCTTCCACGTGGGCGAGATGCACGATCCCGCCAGGAACATCCAGTTTGGCGCGTACTATCTGAAACACGTGCAGACCATGCTGGACGGCTCTCCCGTGCTGGCCACCGCCGCCTACAATGCCGGCCCCGGGCGGGCACAGCGCTGGCGCGATGCCCGCCCGATGGAAGCCGCCATTTACATCGAATCGATCCCCTTTGCCGAAACGCGTGACTATGTGAAGAAAGTCATGAGCAACGCCATGCATTACGCGGAGCGTTTTGGACAGCCTTCGGTCCTGCTGAAAGATCGGCTTGGCGTGGTGCCTCCGCGTGCCATGCCGGTCACGCCGACACCCGATCCGGACACGTCGCTGGAAGTTGAACGTCCGGACGATTAG
PROTEIN sequence
Length: 663
MAAACYPRTMLRTLLFFLLTALAATAVWAAPGDAAVKQAQQAYAARKLPELERAARKIPADHVLTPYVEYWRLMLERRTDDGRIKDFLARYPGSRLAEILRADWLKSLGAREAWPVLLAEYPRLAKPDVALQCYAYRAEWAQGNRSHEREAVSLWFTGRDMPSTCTPLFTQLIAAGLIGGEDLWRRFRLALEAGNLNVARAVATLLPEAQRPSAALLDQAARDPARVLNAGGLDPARRGDREIMLYAFDQLARRDSAQAEQALGKWASQLNPLDLRAAWARLATWAARRHETVALEWFKQAGDVAVSDYQREWWTRAALRAGDWKAAQQAMGNMRDDVREQPVWRYWRARALQASGKHPAANAIFLALSRDYGYYSQLAQEELGPVMQAPVAKVKTGGDDVEAIARQPGIARAVALYGLGLRDDARQEWNWTIRDFSDPQLLAAAELARRMEWYDSAINTAERTRELHDFELRFLTPYRELARQAARENGIDEAWVYGLMRQESRFVNVAQSSVGASGLMQIMPATARWIAQRLGFKRFHVGEMHDPARNIQFGAYYLKHVQTMLDGSPVLATAAYNAGPGRAQRWRDARPMEAAIYIESIPFAETRDYVKKVMSNAMHYAERFGQPSVLLKDRLGVVPPRAMPVTPTPDPDTSLEVERPDD*