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scnpilot_expt_750_bf_scaffold_1194_10

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 8841..10346

Top 3 Functional Annotations

Value Algorithm Source
putative RND efflux system outer membrane lipoprotein NodT id=12493134 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 502.0
  • Bit_score: 950
  • Evalue 9.40e-274
  • rbh
Putative RND efflux system outer membrane lipoprotein NodT {ECO:0000313|EMBL:CBH98940.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage met similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 481.0
  • Bit_score: 718
  • Evalue 6.40e-204
putative RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 486.0
  • Bit_score: 678
  • Evalue 1.50e-192

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1506
ATGCGGTATTTCAGCTTGCCCCTACACAGATATGCCCTGGGTCTGCTCGGCATCATGGTGCTGGCGGGCTGCACGACGGTCGGTCCCGATTTCAAGACGCCGGACGCGCCCGCGGTCGAGCGCTACCTGCAGGGCGAGCGGCCCGCCCGCACGGCCTCGGCCGATGTCGGACAGGGGCGCGCACAAAGCCTGGAAGCCGGCCAGGCCGTCGCGTCCGAGTGGTGGACGGCATTCGGCTCGCCCCGGCTCGACGCGTTGGTGAAGCGGGCATTGCACGAGAGCTTCACGCTGGCCGCGGCAGAGGCCACGCTGCGCCAGGCACAGCAACTCCATGCGGCGCAGGCGGGTTCGACCCTGTATCCGACCGTTAACGCCAGGCTGGGCGCCAGCCGCAACCAGGTCAATGCGGCCGGCCGTGGCGAACACGGAAATCAGCAGACGCTGTACAACCTGTACAACGCCGGGGTCGTCGTCAACTACAATTTGGACCTCTTCGGGGGCAACCGCCGCGCCCTCGAAGCACTGGCCGCGCAGGCCGATTATCAGGCCTACCAGCTGGCCGGCGCGCGTCTGGCTCTTGCCGGCAATGTCGTGACCACCGCGTTCGGGCAAGCCCAGCTGGGTGAGCAGATCGCGGCCACTGAAGCCATCCTGCTGGCCCAGCAAGACCAGCTCGACATTGCACGCAAGCGCTTTGAGCTGGGGGCCACGGCCCGGGCGGATGTGCTGGCCCTGCAAACCCAGGCGGAGCAGACGCGTGCCAGCCTGCCCCCCCTGCGCAACAAGCTGGAACAGGCCGATCATCTGCTGGCGGTGCTGACCGCGCAGGCGCCCGGCGAGGCCGATATCCCGCGCTTCACGCTGGCCGATTTCACCCTGCCTGAACATCTCCCCCTGGTGGTGCCGTCCGATCTGGTGCGCCAGCGACCCGACATCCAGGCGTCCACCGCCTTGCTGCATGCGGCCACGGCACAGTACGGCGTGGCCATTGCCAGTCTCTATCCGCAGATCGACCTGAGCGCCAGTCTGGGCACCCAGGCCCTGACCACCGGTGCGCTGTTCGGACCCGGATCGGTGATCTGGGCCCTGGCCGGGCAACTCGCCCAGCCGCTGTTCAACGCCGGTCTGAAAGCCGGGGCGAATGCGGCCGAAGCCAGCCTGCAGGCGGCTGGCGCCAATTACCGGCAGACCGTGCTGGAAGCGCTGCGCAGCGTGGCCGATACGCTGCGTCAACTGGACAACGATGCCCAGGCCCTGCAGGCCCAGGCCACCGCGGAGGCCTCGGCACGGGCATCGCTCGAACTGGTGCAGCAGCAGCACCAGCTGGGCGCGGCGAGCTACCTGCAGCTGCTCACGGCCCAGCAGCAGGCGCAACAAACCCGTATCGACCTGGTTGCGACCCGCGCCGCCCGCCTGGCCGACAGTGCGGCGCTGTACCAGGCCATGGGCGGCGGCGTACTGGATGCGCCCGCTACGCCGGCCGCGGCGCCGGCCGCGATCCGGTGA
PROTEIN sequence
Length: 502
MRYFSLPLHRYALGLLGIMVLAGCTTVGPDFKTPDAPAVERYLQGERPARTASADVGQGRAQSLEAGQAVASEWWTAFGSPRLDALVKRALHESFTLAAAEATLRQAQQLHAAQAGSTLYPTVNARLGASRNQVNAAGRGEHGNQQTLYNLYNAGVVVNYNLDLFGGNRRALEALAAQADYQAYQLAGARLALAGNVVTTAFGQAQLGEQIAATEAILLAQQDQLDIARKRFELGATARADVLALQTQAEQTRASLPPLRNKLEQADHLLAVLTAQAPGEADIPRFTLADFTLPEHLPLVVPSDLVRQRPDIQASTALLHAATAQYGVAIASLYPQIDLSASLGTQALTTGALFGPGSVIWALAGQLAQPLFNAGLKAGANAAEASLQAAGANYRQTVLEALRSVADTLRQLDNDAQALQAQATAEASARASLELVQQQHQLGAASYLQLLTAQQQAQQTRIDLVATRAARLADSAALYQAMGGGVLDAPATPAAAPAAIR*