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scnpilot_expt_750_bf_scaffold_1418_15

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(13352..13912)

Top 3 Functional Annotations

Value Algorithm Source
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB id=12495123 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 372
  • Evalue 2.30e-100
  • rbh
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 186.0
  • Bit_score: 356
  • Evalue 2.40e-95
greB; transcription elongation factor GreB similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 187.0
  • Bit_score: 334
  • Evalue 2.00e-89

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGAATAAGGCATTCGTCAAGGAAACCGATGCAGCGGATGCCGACGAAGACGACATCGCCGCGCCCGCGTTGCCCGCCGGATCAAAAAACTACATGACACCCGCGGGCTACGCGCGGCTCGACGCTGAATTCAACCAGTTGTGGAAGGTCGAGCGGCCCAAACTGGTGGAAACCATCTCGTGGGCCGCCAGTAACGGCGACCGCTCGGAAAACGGCGACTACATTTATGGCAAGAAGCGCCTGCGTGAAGTCGATCGGCGCATCCGCTTCTTGTCCAGGCGTCTGGAGCACGCCGAAGTCGTCGACCCGGCCACCCGCGAGGATACCGACCAGGTGTTTTTCGGTGCCACCGTCACGATCGCGGATGCAGACGGCCGCGAGTCCACCTTCGCCATCGTCGGCCTCGACGAAGCCGATGCGGGACGTGGCCGCATCGCCTGGATATCACCGATGGCGCGCGCCCTGCTGAAAGCGCGCGAAGGCGACACCGTCAACGTGCAGACGCCCGACGGGCACCGCGAAGTTGAAATTATCGAGGTGCGCTACCAGGCCATCGATTGA
PROTEIN sequence
Length: 187
MNKAFVKETDAADADEDDIAAPALPAGSKNYMTPAGYARLDAEFNQLWKVERPKLVETISWAASNGDRSENGDYIYGKKRLREVDRRIRFLSRRLEHAEVVDPATREDTDQVFFGATVTIADADGRESTFAIVGLDEADAGRGRIAWISPMARALLKAREGDTVNVQTPDGHREVEIIEVRYQAID*