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scnpilot_expt_750_bf_scaffold_1134_6

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(3072..3551)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM id=12493277 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 160.0
  • Bit_score: 325
  • Evalue 2.80e-86
  • rbh
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 159.0
  • Bit_score: 292
  • Evalue 4.70e-76
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 159.0
  • Bit_score: 278
  • Evalue 1.10e-72

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGGGCGCATCGCCGCCCCATTCGGTATCAAGGGCTGGGTCAAAGTCCAGCCCTACAGCGAAGACCCGGACGCGTTGATGGATTTTGAATCCTGGCGCGTCGGCCGTGACGGACAACAGAGGCATTACAGCGTCGAAGCCGTCCAGGACCATGGCAAAGCCCTGGTCGCCAAACTGGCCGGCATCGACGACCGCGACACGGCGTATGCCCTGCGCGGACAGGAAATCTCGGTGGCGAAGAGCGCATTACCGCCGCCGGGGGAAAACGAGTTTTACTGGTCGGATCTGATCGGTCTGAAAGTCGTCAACCGGGAAGGCGTCGAACTGGGCACGGTCGACAGCCTGATGGAAAGCGGCGCGAACGATCTGCTGGTCGTCAAGGGTACGCGCGAACACCTGATTCCGTTCGTCGCGGCCTTCGTCGGCAAGGTGGATCAGACGGGCAGAACGATCGAGGTGGACTGGGGCGAAGATTACTGA
PROTEIN sequence
Length: 160
MGRIAAPFGIKGWVKVQPYSEDPDALMDFESWRVGRDGQQRHYSVEAVQDHGKALVAKLAGIDDRDTAYALRGQEISVAKSALPPPGENEFYWSDLIGLKVVNREGVELGTVDSLMESGANDLLVVKGTREHLIPFVAAFVGKVDQTGRTIEVDWGEDY*