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scnpilot_expt_750_bf_scaffold_1643_1

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 1..474

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K03585 membrane fusion protein id=12494399 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 158.0
  • Bit_score: 310
  • Evalue 1.20e-81
RND family efflux transporter MFP subunit; K03585 membrane fusion protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 156.0
  • Bit_score: 282
  • Evalue 3.70e-73
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 151.0
  • Bit_score: 190
  • Evalue 3.80e-46

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
CTGCGGCTGAAAAGCGCGCTCGCAGACGGCCAGTTGAAAGCGACAAACAGCCGCATCGTGGAACTCATCCTGGAAAACGGCCAGCCCTATTCCCACAAGGGCCGGCTCTTCTTCAGCGACCTGAGCGTGGATCCCGGCACCGGCGCCGTCACGCTGAAAGCGGAATTCCCCAATCCGCAGCGTCTGCTGCTCCCCGGCACCTTCGTGCGGGTACGGCTGCCCCAGGCCGTTGCGGAAAACGTGATCACCGTGCCGCAGCGTGCGGTGATGTCCGGGCCGCAGGGCCAGTTCGTTCTGCTGGTGGGGCCGGAAAACAAGGTCACGCCGCGGCCGGTGAAGCTTGGCGCCATGTCCGGAACCGATTTCGTCGTCGAAGACGGCCTCAAGAACGGCGAGACCCTGATCGTGGACGGCGTACAGAAAGCCCGGCCAGGCACGGTGGTGAAACCCGTCGTGTCGAAACAGGGCCACTGA
PROTEIN sequence
Length: 158
LRLKSALADGQLKATNSRIVELILENGQPYSHKGRLFFSDLSVDPGTGAVTLKAEFPNPQRLLLPGTFVRVRLPQAVAENVITVPQRAVMSGPQGQFVLLVGPENKVTPRPVKLGAMSGTDFVVEDGLKNGETLIVDGVQKARPGTVVKPVVSKQGH*