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scnpilot_expt_750_bf_scaffold_2030_13

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(13388..13714)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome c, class I id=12493234 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 223
  • Evalue 1.00e-55
cytochrome c, class I similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 108.0
  • Bit_score: 155
  • Evalue 1.20e-35
Cytochrome c, class I {ECO:0000313|EMBL:CAD84837.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europ similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 108.0
  • Bit_score: 155
  • Evalue 6.10e-35

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Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
CTCATGGCATTGAGCGGCCCGGCGGATCTGGTGAGCAAGGGTGCGTTCAAGGGCGACAAGGTGAGCATGTCCATGGGCGCGATGTTCTTCAACAAGCTTCGCGGCTGCGCCGCCTGCCATCAGGCCAAGCCCGGCACGGGCGGCTCCTCGGGGCCTGAGCTTTACACCGCGGGCGAGCGTTTGCAGGCTGATTACATCTACAGCTACATCAAGAACCCGCAGGCGATCGATCCGCACATCTGGATGCCCACGCTCAATCTGGCCGAGCCGGACCTGCAGCGGTTGACGGGCTACATCCTTCAACTCAGCGCATCGGAGGGGAAATGA
PROTEIN sequence
Length: 109
LMALSGPADLVSKGAFKGDKVSMSMGAMFFNKLRGCAACHQAKPGTGGSSGPELYTAGERLQADYIYSYIKNPQAIDPHIWMPTLNLAEPDLQRLTGYILQLSASEGK*