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scnpilot_expt_750_bf_scaffold_2625_1

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 2..421

Top 3 Functional Annotations

Value Algorithm Source
putative squalene/phytoene dehydrogenase id=12493537 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 140.0
  • Bit_score: 282
  • Evalue 2.30e-73
putative squalene/phytoene dehydrogenase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 139.0
  • Bit_score: 223
  • Evalue 1.80e-55
squalene/phytoene dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 139.0
  • Bit_score: 214
  • Evalue 2.20e-53

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
CAGCCCATTGCCACCGCCTACATGCAATACGATCCGGCGTTCCGGCTGTCGAGGCCACTGTTCGCACTGAACAACGGGCCGGCGCAGTTCGTATTCGACCGCGGCCAGAGTCATGGCCAGGCCGGCCTGCTGGCGTTTGTGGCCAGCACCGCGACCCACCTCCCCCCGGACTGGCTGGATCTGGCTGAAGCACAACTGCACCGGATCGCTCACCCCGGCCCCGCTCGCTGGCGCAAGCGCATCATCGAAAAACAGGCAACCTATAGTTGCGTACCCGGCATGGCGCGTCCTGCCCTACGCACCCCGCACCCGCGCATCTTCCTGGCGGGCGATTACACTGCCGGGCCTTATCCCGCCACGCTCGAAAGTGCAACGCGGAGCGGAGTACAATCGGCCGGCGCATTACTCGAACAGCTATGA
PROTEIN sequence
Length: 140
QPIATAYMQYDPAFRLSRPLFALNNGPAQFVFDRGQSHGQAGLLAFVASTATHLPPDWLDLAEAQLHRIAHPGPARWRKRIIEKQATYSCVPGMARPALRTPHPRIFLAGDYTAGPYPATLESATRSGVQSAGALLEQL*