ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_bf_scaffold_2315_15

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 12703..14391

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein id=12495222 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 563.0
  • Bit_score: 1147
  • Evalue 0.0
  • rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 562.0
  • Bit_score: 736
  • Evalue 3.30e-209
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 561.0
  • Bit_score: 726
  • Evalue 5.30e-207

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGACTTCACTGGCAGATAAATTCGCTTCGCGCCTGGCCAACCTGGCGCCTTTTGGCAAGCGCACCGACGATCCGCTGGCCAACCTCAAGACGGCTACCCGCTGGATCGAGAGCCTGCCCATCGGCGATGCATTCAAATGCCAGGACGCCATTCTCGTTGCGCTCAAGCGCTTCAACGAGAACTCGACGCAATACACGAAAGATCGCCTGGCCATCTTCATGCTGCTGGACGAGAAATCACGCGATTTGCAAGACACGCTGGTGCGCCAGTACCTGCGCAATCCGCGCATGTCGCGCCCCGCCGAAAGCCAGCTCTGGCATGCCGTGTATGGCCTCTACTGGGAGATTGCGCGCGGCTACCACGCCTTTGTGCTGCATCTGGCACAGACGGCCGGCAAGGTGCCGCACGAAGAATCGGTCCCGCTGATCACCCTGCGCGCCATCCAGACCTTTGGCCAACTGCTGAAATGGCGCGCCATCCGCTATCTGCCGGCGGGCGAAAAACTCTGGCTGCGGCTCCACAACCTGTATCGCATCGCCGAAACCGAGGACTTTCATCGCCAGACTCAGCGTGCCTACGCCGAGGACGCGGCCGGCTGCAGTTGCGAAACCGCCTACCTGCACGTCCTGATGCTGAGTCTGGCCCATTCCGGCACGCTCTATCCGCGTCAGCTCGACCAGGCCGACCGCTGGCTGTGCGGCTGGCACGACCTGCTTCGAATGGACAGGCGGCTCGACCCCGGCACCGATCATTTCGTCGTCGACCTGTCGGCCGATCACGGCCCGCGCCGCATGCGCAAACCCGATACCGACAAACCCCTGCGTTTCTGGTCCACCACCGAGCTGCTGCACACGCTGCAGCAGCTGCGCGCGGCGCTCCAGGCCGGCACTCCACCGGCGCAACTTGGCCTGACGGATACCGCACGCGCAGCCGAAAGCCTCGACCTGCTCGAACACCTGCAACATCAATGGGCTTCGCTGGCCACGCGCGAGCAGCGGCGTGCGCCGCGCGAATCGGTCAAGCGGCTGGTCGACGTGACTCACGGCCTCGATGCCATCGTCGGCCAGATCAAGGCCATCGAAACCCCCGCCAGCGTTTCGCCTTATGGGACCGGCCTGAATTACAACGAAGCCGACGATGTACAGGTATACGGCTTCATCACCGACCGCACGCGCGAACGCGTCTCGCAAATGACCTTGCCGGCCACCCGGCATTCGCCGGACGTCGAACGCTGGGTCATGCACGACGAAAGCGAATTCGGATATGGCGCCATCGTCGAATCGCGCGACAAGGACTGGCTGCGCGTGGGGGCGCTCATCGGCATCAAGCCGCACGACGCCCGCGACTGGCAGCTCGGCATCGTGCGCCGCCTGTCCCGCCTCAACGACGACACCAGCTCGGTCGGTATAGAAACCCTGGCCGAAAAACCCGTCCTGACCATGCTGCACGACACCGCCACGTCAGGGTATACCGTCAACGGATTCGACAATGGCAGCACCGGCCTGCCTCACCCGGGTTTATGGCTGGATGGCGACCGCAAGACCCTGATACTCGATCCGATCCACTTCGGGCTGGGCAAGGTGTTCCGGATCCATGGCGCATCAGAACGCCGATTCATCGCGCTGGGCAACCCGATCGAACGCAGCGAAGGCTGGACCCGGGTAGCCTTCGAACCGGTCAACAGCTGA
PROTEIN sequence
Length: 563
MTSLADKFASRLANLAPFGKRTDDPLANLKTATRWIESLPIGDAFKCQDAILVALKRFNENSTQYTKDRLAIFMLLDEKSRDLQDTLVRQYLRNPRMSRPAESQLWHAVYGLYWEIARGYHAFVLHLAQTAGKVPHEESVPLITLRAIQTFGQLLKWRAIRYLPAGEKLWLRLHNLYRIAETEDFHRQTQRAYAEDAAGCSCETAYLHVLMLSLAHSGTLYPRQLDQADRWLCGWHDLLRMDRRLDPGTDHFVVDLSADHGPRRMRKPDTDKPLRFWSTTELLHTLQQLRAALQAGTPPAQLGLTDTARAAESLDLLEHLQHQWASLATREQRRAPRESVKRLVDVTHGLDAIVGQIKAIETPASVSPYGTGLNYNEADDVQVYGFITDRTRERVSQMTLPATRHSPDVERWVMHDESEFGYGAIVESRDKDWLRVGALIGIKPHDARDWQLGIVRRLSRLNDDTSSVGIETLAEKPVLTMLHDTATSGYTVNGFDNGSTGLPHPGLWLDGDRKTLILDPIHFGLGKVFRIHGASERRFIALGNPIERSEGWTRVAFEPVNS*