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scnpilot_expt_750_bf_scaffold_2315_23

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 22675..23322

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC id=12494606 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 216.0
  • Bit_score: 412
  • Evalue 2.30e-112
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 215.0
  • Bit_score: 384
  • Evalue 1.20e-103
type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 215.0
  • Bit_score: 369
  • Evalue 4.80e-100

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGCCGCAGGTGCTGGGCCTGGTCAAGACCATGGGCGTGGCGCTGCCGCTGCCGACGCTGATCCTGATGGCGGTATCGAGCGCGCTGCGCACGTACTGGCTGATCGGCCTGGCGCTCGCGCTGCTACTCGGCATCGGGCTGCCGCTCTGGGTGAAGGGAAGCGAAGCCGGGCGCGAATGGTGGGACCGCATCCAGTTGCGGCTGCCCGTCATCGGACCGATCGTGCAGAAGATCGTGCTGTCGCGCTTCACCAACACGCTGGCGATGATGTACCGCTCGGGGGTGACGGTGCTCGACGCATTGCGCGCGGGCGAAATGGTGGCCGGCAACCGGGTGATCGCCGGCGGCATCCGCCGCGCCGCGCAGCAGATTGCCGACGGGCGCGGGTTGTCGGAAAGCTTCCAGTCGCTGGCGCTGTTTCCACCGCTGGTGATCCGCATGCTGCGCGTGGGCGAAAGCACCGGCGCGCTCGACGAGGCGCTGGACAACGTGACGTTCTTCTACAACCGTGAAGTGCTCGACTCGATCGAAAACGGCCTGCGGGTTCTGGAGCCGCTGCTCACCGCCATTCTCGGCCTGCTGCTCGGCGGCATCCTGGTGTCGGTGCTGCTGCCGATTTACGACCTGATCGGGAATTTGCCGCTATGA
PROTEIN sequence
Length: 216
VPQVLGLVKTMGVALPLPTLILMAVSSALRTYWLIGLALALLLGIGLPLWVKGSEAGREWWDRIQLRLPVIGPIVQKIVLSRFTNTLAMMYRSGVTVLDALRAGEMVAGNRVIAGGIRRAAQQIADGRGLSESFQSLALFPPLVIRMLRVGESTGALDEALDNVTFFYNREVLDSIENGLRVLEPLLTAILGLLLGGILVSVLLPIYDLIGNLPL*