ggKbase home page

scnpilot_expt_750_bf_scaffold_2536_6

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: 3059..3748

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator id=12493910 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 230.0
  • Bit_score: 462
  • Evalue 2.70e-127
LysR family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 228.0
  • Bit_score: 386
  • Evalue 2.60e-104
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 228.0
  • Bit_score: 232
  • Evalue 9.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGGATGCCGCCGAAGCCAGTCTGACCGAGGACCGCCAGACGCCACGCGGCCATCTTCGCATCGCGCTGCCATTCTCCTTCGGCATTCGCCAGCTGATGCCGATGATTGGCGATTTCATGGCCGCCAACCCCGACATCTCGATCGAACTGGAATTCAGCGACCGCCGCACCAACCTGATCGAAGGGGGATTCGATCTCGCCATCCGCATCACCGACCGGCTCGAGCCGGGCGATGTGGCGCGCAAGATCGGCCACAGCCGGAGCGTCGTGGTGGCGGCACCCGGCTACGTGGAATGTTGCGGCCGTCCGCATCATCCCGGCGACCTGATCCAGCACGAGTGTTTCGGCTATGTGCTCGCGGCGCGCACGAGCTGGCCCTTCATCATCGACGGCAGGACAGAATGGTTTCCGGTGGCCGGGCGGCTCGAGGCCAACAGTGGCGACGCCCTGCTTGCCGCCGCCATCGGCGGGCTCGGCATCGCCAGCCTGCCTGCCTTCATCGTCGACACGGCGGTGCGCGAGCATGGCCTGGAGATACTTTTGCCCACGTTCAGCACGCCCGAACTGGGCATCTACGCGATTTTTCCGAGCAATCGCTACGTGCCGCATCGCGTCAGGACGCTGGTCGAATGCCTTGTGCGGCGGATCGGCCATCAACCGTCATGGAACGACATCCTGCCTCAAGGGTAG
PROTEIN sequence
Length: 230
VDAAEASLTEDRQTPRGHLRIALPFSFGIRQLMPMIGDFMAANPDISIELEFSDRRTNLIEGGFDLAIRITDRLEPGDVARKIGHSRSVVVAAPGYVECCGRPHHPGDLIQHECFGYVLAARTSWPFIIDGRTEWFPVAGRLEANSGDALLAAAIGGLGIASLPAFIVDTAVREHGLEILLPTFSTPELGIYAIFPSNRYVPHRVRTLVECLVRRIGHQPSWNDILPQG*