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scnpilot_expt_750_bf_scaffold_2076_10

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(7834..8325)

Top 3 Functional Annotations

Value Algorithm Source
nsrR; HTH-type transcriptional regulator NsrR id=12493232 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 164.0
  • Bit_score: 322
  • Evalue 2.40e-85
  • rbh
HTH-type transcriptional regulator nsrR similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 161.0
  • Bit_score: 178
  • Evalue 1.20e-42
HTH-type transcriptional regulator nsrR {ECO:0000313|EMBL:CBI09185.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 139.0
  • Bit_score: 178
  • Evalue 6.00e-42

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 492
ATGCGCCTGACCAAGTTCACGGACTATGCCTTGCGGGTCGTCATGTATCTGGCGCGCCATCCGGACGGTCTGGCCACGATTGCCGACATCGCGCGCGAATACGACATTCCTTCCACTCACCTGATGAAAGTGGTGCACCGTCTTGCACAATGCGGCTACATCGTGACCGTGCGCGGAAAGGGGGGCGGCATGCGGCTCGCCCGGGCACCCGCCCTGATCAACGTGGGCGAGCTGGTACGGGATACCGAAGACAACATGGATATCGCCGAATGCTTCAGCGACGAAAATCAGACCTGTCCGATGCTGCCCGCCTGCACGCTCAGATCCATCCTGATCGAAGCTCGCAAAAGCTTTCTGGCCACCCTGGATTTTTATCGCCTGTCGGACATCATGGATCATCCCATGGCATTACATGCCGCCTCATTGCGCCCGCTACCTGACAGCCCGGTTCGCATGAGCCCCCCCGCAAAAACCGGCAAGGGAACAGCCTGA
PROTEIN sequence
Length: 164
MRLTKFTDYALRVVMYLARHPDGLATIADIAREYDIPSTHLMKVVHRLAQCGYIVTVRGKGGGMRLARAPALINVGELVRDTEDNMDIAECFSDENQTCPMLPACTLRSILIEARKSFLATLDFYRLSDIMDHPMALHAASLRPLPDSPVRMSPPAKTGKGTA*