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scnpilot_expt_750_bf_scaffold_2105_3

Organism: SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220

near complete RP 48 / 55 MC: 7 BSCG 48 / 51 MC: 7 ASCG 13 / 38 MC: 2
Location: comp(2606..3838)

Top 3 Functional Annotations

Value Algorithm Source
CzcC family heavy metal RND efflux outer membrane protein id=12493408 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 411.0
  • Bit_score: 785
  • Evalue 2.50e-224
  • rbh
CzcC family heavy metal RND efflux outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 408.0
  • Bit_score: 502
  • Evalue 1.20e-139
Heavy metal RND efflux outer membrane protein, CzcC family {ECO:0000313|EMBL:AAZ97288.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydr similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 408.0
  • Bit_score: 502
  • Evalue 5.90e-139

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
GTGCTGCTTGCCGGGCTGAGTCCGGCCGGCCATGCGCTGACGTTCGACGGGGCGCTGCGCCTCGCCGAAACGCATGCCCCCCAGTTGAAGGCCAGCGAGGAAAGCCTCGCCGCCGCCCGTTCCCTGCAGATTCCCGCAGGCGCCCTCCCCGATCCCAGGCTGGTGCTGGGCGTCGACAACCTGCCGATCGAAGGCACCGACCGCTACAGCCTGACCCGTGACGCCATGACCATGCAGCGCATCGGGCTCATGCAGGAGTTTCCCAACGCAGCCAAGCGGGAGGCGCGCGTCGCGGCGGCTCAGGGCCAGGTCGCCCTGAGCGAAGCCGAGGCCCGCATTGCGCGGCTGACCGTGCTGCGCGAGACCGCCGTCGCCTGGATCGCCCGCCACAGCGTCGAGCGCCAACTGGCACGCATCGATGCCCTGACGGCGGAAAACCGGCTGCTCGCGTCCGCGGTTCGCGCCGAACTCGCCGGCGGCCAGGGATCGCCGGCGGACATCGTCGCCCCGCGCCAGGAGGCGGCCCTCATCGACGAACGGCGCGACGCCTTGCGCGCGCAGCAGGCACAGGCGATCGCGGCGCTGCGGCGCTGGATCGGTGCGGCGGCCGATGCCCCGCTCGAAGGCGGCGCGCCGGCGTGGCCGCTCCAGCGCGACACCCTGGAACATCGCCTGCATCATCATCCGGAACTGCTGGCGTTCGATTCCCGGGCACGCGTGCTGGACGCGGGCGTCGCCGAAGCGCAGGCGGCGAAGCGGCCCGACTGGGCGCTGGAAATGGACTATCAGCATCGTGCCCGGCAGTACGGCGATATGGTGTCGTTGCAGGTCAGTTTCGACCTGCCGGTTTTTTCCGGCACGCGCCAGAACCCGAAAATCGCCGCCGCGCGCGCCGAACGCGCACGCCTCGATGCGGAGCGCGAGGCCACGTTGCGCGAGCACGCCGCGATGCTGGCGAGCGATTTCGCCGATTACCAGCGCCTCACTGCCGCCGTCGAACGGCAGCGCGAGATCCTGCTGCCGCTGGCGCAGGAAAAGGTCGACCTCGCCATGGCCGCCTGGCGCGGCGGCAAGGGCCGCCTGACCGAACTGGTCGCCGCGCGCCGCGAACGCATCGACGCCGAACTCAAGGCCATCGCGCTGGAAGGCGAACAGCAGCAAACCGCCACGCGCCTGCACTATGCCTACGGCGATGGTGATGGCGCCGACCCGCACACGGGAGAACACCCATGA
PROTEIN sequence
Length: 411
VLLAGLSPAGHALTFDGALRLAETHAPQLKASEESLAAARSLQIPAGALPDPRLVLGVDNLPIEGTDRYSLTRDAMTMQRIGLMQEFPNAAKREARVAAAQGQVALSEAEARIARLTVLRETAVAWIARHSVERQLARIDALTAENRLLASAVRAELAGGQGSPADIVAPRQEAALIDERRDALRAQQAQAIAALRRWIGAAADAPLEGGAPAWPLQRDTLEHRLHHHPELLAFDSRARVLDAGVAEAQAAKRPDWALEMDYQHRARQYGDMVSLQVSFDLPVFSGTRQNPKIAAARAERARLDAEREATLREHAAMLASDFADYQRLTAAVERQREILLPLAQEKVDLAMAAWRGGKGRLTELVAARRERIDAELKAIALEGEQQQTATRLHYAYGDGDGADPHTGEHP*