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scnpilot_expt_750_bf_scaffold_103_1

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(1..387)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AsnC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYK6_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 128.0
  • Bit_score: 225
  • Evalue 4.10e-56
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28784.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 129.0
  • Bit_score: 228
  • Evalue 4.00e-57
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 128.0
  • Bit_score: 225
  • Evalue 1.20e-56

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGACGCCTCTCGACGCCCTCGACCTTCGCCTTCTCGAACTCGTGCAGGCCAACAGCCGCATGCCGCAGAGCGAACTCGGCGAGCGGGTGCATCTGTCGACGGCGGCCGTCAACCGGCGGTTGAAGCGCATGCTCGACGAGGGCGTGATCCAGCGCTACGGCGCGGTGCTGTCGCCCGCCGCGCTGGGCCACCCGCTCACCATCGTGGCCGAAGTGGAGACCGAGAGCGAGCAGATCGAGCTGCTCGACGCAATGAAGCAGAGCTTTCGCGACTGCCCGCAGGTGCAGCAGTGCTACTACGTGACGGGCGAGTGGGACTTCATCCTGGTCTTCGTGGTGCGCGACATGGCGCAGTACACCGCCCTGAGCCGCCAGCTTTTCTTCCAG
PROTEIN sequence
Length: 129
MTPLDALDLRLLELVQANSRMPQSELGERVHLSTAAVNRRLKRMLDEGVIQRYGAVLSPAALGHPLTIVAEVETESEQIELLDAMKQSFRDCPQVQQCYYVTGEWDFILVFVVRDMAQYTALSRQLFFQ