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scnpilot_expt_750_bf_scaffold_103_7

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 6004..6951

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SSV2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 313.0
  • Bit_score: 545
  • Evalue 2.60e-152
  • rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28789.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 314.0
  • Bit_score: 548
  • Evalue 7.20e-153
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 314.0
  • Bit_score: 544
  • Evalue 2.70e-152
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGAACCTGCTCGCTTCGATGCGCTATCTGGTCGCGCTGAGCGAGCACAAGCATTTCGGCCGCGCCGCGCAGGCCTGCCACATCACCCAGCCGGCGTTGTCCAACGCGCTGCGCGCGCTGGAGAGCGAGTTCGGCGTCGTCATCGTCAAGCGCGCGCGGGTGTACGTGGGCCTCACGCACGAAGGCGAACGCGTGCTGGCCACCGCGCAGCGCATGCTGCGCGACAACGAGGTGCTGCTGCAGGAGCTGCGCAGCGAAGAGGGCGACCCGCACGGGCGCTTGCGCATGGCGGCCGTGCCCACGGCCATTCCGATGCTGTCGCGCTTCGCGGCCATGCTGCAGCAGCGGCATCCGGGCATCGTGCCCGCGGTGCTGTCGATGAGCTCGCAGGAGCTGGAAACGGGCCTGGAGAGCCTGTCGGTCGACCTCGCGCTCGGCTACACCGAGCGCATGCACCTGCCGGGCATCAAGCTCTCGGCCTGGCCGCAGAGCATCGAGCATTACTTCCTGCTGCGGCGCGCGAAGAAGGCGTCGGCCGACCAACTGCGCATCGGCAAGCCCATGCCCTGGGCCGAGGCCGGCCAGCTGCCGCTGTGCCTGCTCACGCCCGACATGCACAACCGCGCCATCATCGACCAGGCGCTGCGCGAAGCCGGCGTGCCGGTGGCGCCGGCCATCGAGACCAACTCGGTGCTGGCGCTCGCGCTGGCCGTGAGCGTGGGCACGGTCAGCAGCGTGCTGCCGGGCGCGATGGTGGCGGCGGTGCGCAGCCACCGCGAGCTGGAGGCGCTGCCGCTGGTGTCGCCCGAAGTGCGCACGCCCATCGGCTTCATGACGCAGGACGGCGTGCGAAGCTCGCGCGCGCTCGACGCCGCGCTGGCGTTCCTGCGGACACCCGAGTGGCAGGCGCAGGTGCAGCAGCACAGCGGGACGCTCGGCGGCACCTAG
PROTEIN sequence
Length: 316
MNLLASMRYLVALSEHKHFGRAAQACHITQPALSNALRALESEFGVVIVKRARVYVGLTHEGERVLATAQRMLRDNEVLLQELRSEEGDPHGRLRMAAVPTAIPMLSRFAAMLQQRHPGIVPAVLSMSSQELETGLESLSVDLALGYTERMHLPGIKLSAWPQSIEHYFLLRRAKKASADQLRIGKPMPWAEAGQLPLCLLTPDMHNRAIIDQALREAGVPVAPAIETNSVLALALAVSVGTVSSVLPGAMVAAVRSHRELEALPLVSPEVRTPIGFMTQDGVRSSRALDAALAFLRTPEWQAQVQQHSGTLGGT*