ggKbase home page

scnpilot_expt_750_bf_scaffold_103_23

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(19161..20210)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-selenouridine synthase {ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|SAAS:SAAS00035457};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 349.0
  • Bit_score: 664
  • Evalue 7.70e-188
tRNA 2-selenouridine synthase n=1 Tax=Variovorax sp. CF313 PF0_9BURK">RepID=J2SPF0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 349.0
  • Bit_score: 664
  • Evalue 5.50e-188
  • rbh
tRNA 2-selenouridine synthase similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 345.0
  • Bit_score: 645
  • Evalue 9.70e-183

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGAGTCATCGCCAGCCCGTGCGGGTCGGCGACCGCCACGCCTTCGACACGCTGATCGACGCCCGCTCGCCGGCCGAGTTCGCGCTCGACCATATTCCCGGCGCCATCAACTGCCCGGTGCTCGACGACGAGGAGCGCCGCATCGTCGGCACCGTCTACGTGCAGACCGGCGCCTTCGAGGCGCGGCGCATCGGCGGTGCGATGGTCGCGGCCAACATCGCGCGGCACCTGCGCGACACGCTGGCCGACCGGCCCGAGAACTGGAAGCCACTGGTCTACTGCTGGCGCGGCGGCATGCGAAGCGGATCGATGGTCACCTGGCTGCGCCTCGTCGGCTGGGACGCGCAGCAACTCGCGGGCGGCTACAAGAGCTTTCGCCGGCACGTCATTTCGCAGATCGACGCGCTGACGCCCAAGCTGGATCTGCGCGTGATCTGCGGCGCCACCGGCAGCGCGAAGACGCGCGTGCTGCATGCGCTTGCCGCGCGTGGCGCGCAGGTGCTCGACCTGGAAGACTTCGCGAGCCACAAGGGATCGCTGCTCGGCTCGCTGCCGGGTGTGCCGCAGCCTTCGCAAAAACACTTCGAGACGCTGATCGCGGCGGTACTCGAAGGCGTCGATCTTTCGCGCCCGCTGTATGTGGAGGGCGAGAGCATCCGCATCGGACGGCTGTCGCTGCCGTTGTCGCTGGTGGCGCGGATGCGCGCCGCGCAGTGCATCGAGGTGTGCGCCACGCCCGAGGCGCGGCTGGCGTATCTGCTGCGCGACTACGCCTACCTGGGCGACGACCGCGACGCGCTGGCCGACAAGCTGGGGGCGCTGAAGGAACTGCAGGGCAAGGAGACAGTGGCGCGCTGGCAGCAGTGGGCGCATGAGGCGGATCTGCCGCATCTGTTTGCGGAGTTGATGGCACTGCATTACGACCCGCATTACCAGAAGTCGCAGGAGGTGCACTTCAAGGCATGGGCCCAGCGCCGGGGAGTGTCGGCGGCTGACCTGTCGGATCAGGGGATCGAGGCTGTGGCCGAGGCGGTGCTGAGGCTGGGGTGA
PROTEIN sequence
Length: 350
MSHRQPVRVGDRHAFDTLIDARSPAEFALDHIPGAINCPVLDDEERRIVGTVYVQTGAFEARRIGGAMVAANIARHLRDTLADRPENWKPLVYCWRGGMRSGSMVTWLRLVGWDAQQLAGGYKSFRRHVISQIDALTPKLDLRVICGATGSAKTRVLHALAARGAQVLDLEDFASHKGSLLGSLPGVPQPSQKHFETLIAAVLEGVDLSRPLYVEGESIRIGRLSLPLSLVARMRAAQCIEVCATPEARLAYLLRDYAYLGDDRDALADKLGALKELQGKETVARWQQWAHEADLPHLFAELMALHYDPHYQKSQEVHFKAWAQRRGVSAADLSDQGIEAVAEAVLRLG*