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scnpilot_expt_750_bf_scaffold_103_29

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(24831..26738)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000364260D similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 635.0
  • Bit_score: 1116
  • Evalue 0.0
  • rbh
Variovorax paradoxus strain MEDvA23 contig_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28804.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 635.0
  • Bit_score: 1092
  • Evalue 0.0
Selenocysteine-specific translation elongation factor similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 645.0
  • Bit_score: 634
  • Evalue 4.10e-179

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
ATGATCATCGGCACCGCAGGCCACATCGACCACGGCAAGACCACGCTGGTGCGCGCGCTCACCGGCGTCGACACCGACCGGCTGCCGGAGGAGAAGCGGCGCGGCATCTCCATCGAGCTGGGCTATGCGTACCTGCATGCGCCCGACGGCGTCTCGCTGGGCTTCGTCGACGTGCCGGGCCACGAGCGGCTGCTGCACACCATGCTGGCCGGCGCCACCGGCATCGATCATGCATTGCTGGTGGTGGCGGCCGACGACGGCGTGATGCCGCAGACGCGCGAGCACCTGGCGGTAGTGGCGCTGCTTGGCGTGCGCGAGGCAACGGTGGCCATCACCAAGATCGACCGCATCGACGAGAGCATGCGCGAGGCTCGGCTGGCCGAAGTGCGTTCGGACATCGCCGCTCTGCTCGCGCCCACGCCGCTGGCGGGAGCGCCGATGCTGGCTGTGTCGGCGACCACCGGCGAAGGCGTCGACACGCTGCGCGAACGCCTGCTCGACGTCGCGAGCAAGGCACGGGCGCGTGAAGACGACCTGGCGTTCCGTCTCGCGGTCGATCGTGCTTTCACGCTCTCGGGCGTGGGCACTGTCGTCACCGGCACGGTCTTCAGCGGCACGGTGCGCATCGGCGACGAGTTGCGCGTGGTGCCCGGCGACCGCTCGGTGCGGGTGCGCGGCATTCATGCGCAGAACCAGAAGGCCGAATCGGCGCATGCGGGCCAGCGCTGCGCGTTGGCGCTCGCGGGTGTCACCAAGGACGAGATGCATCGCGGCGACTGGGTCTGCGCGCCCGCCATCGCGCTCGCGACCGACCGCATCGACGTGCTGCTCACCCTGTGGCCCGACGAAGCCAAGCCGCTGCGCTCGGGCACCACGGTGCATGCGCATCTGGGCGCGAGCGACGTGATGGCTTCGCTCGCGCTGCTCGACCGCGACGCGCTCGCGCCCGGCGAAACGGCCCTGGCGCAGTTGGTGACGAAGGAAAGCGTCGGTGCATGGCACGGCGACCGGGGCGTGCTGCGCGATGCCTCGGCCACGCGCACCATGGCCGGCGTGCGCGTGCTCGACCCGTTCGCCCCGGTGCGCTACCGGCGCCTGCCGGAGCGGCTGCGCACGCTGGCGGGCTGGGCCATCGACGACCGCGCGGCACGCGTGGCCGCGCTGCTGCACAACGCGCCTCTGGGCATCGACACCGCCCGGCTGGCGCGCGCCCTCTCGCTGCCGGACGAAGCCGCGCTGCCGCTGCCCGCCGACGCGGTGCGCATCGAGCACACGGCCATCGCGCAGCGGCACCTGGATGCGCTCGACGCACAGATCACCGGGCGGCTCGCGGACTTTCATCACGACGCGCCCGACGAGGTCGGCCCCGATGCGCGCCGCCTCAGGCGGCTGGCAGCGCCGCGCACCGACGATGCGCTGTGGCGCCATGCGCTCGATGCACTGGTCGCGCGCGGCGCGCTGGTGCGCAGCGGCACCTGGCTGCATCTGCCCGACCATGCGGCGCGGCTCGGCGAAGCGGAACAGAAGCTGGCGCAAAAGCTGTTGCCGCGGCTGGCGGATGGCGGCTTCGATCCACCGTGGGTGCGCGACCTGGCCAAGGACTGTTCGGCGAGCGAGCCGATGGTGCGGCAGACGCTCGCGAGCCTCGCGCGCCGGGGAGAGGCCTTTCAGGTGGTGAAGGACTTGTACTATCCGCTGGCGACCATCGAGCGGCTGGCCGCGATCGCGCGGGATTGCCTCGATGGTCCGGAAGGTCTGCAGGCTGCAAGCTTCAGGGACGCGACGGGCCTGGGGCGCAAGCGCGCGATCCAGCTGCTGGAGTTTTTCGATCGTGTGGGGCTGACGCGGCGCGTGAAGGATGCGCACCTGCTGCGGCCCGATACGTCGTTGTTCGGGGCGAGGCCGTGA
PROTEIN sequence
Length: 636
MIIGTAGHIDHGKTTLVRALTGVDTDRLPEEKRRGISIELGYAYLHAPDGVSLGFVDVPGHERLLHTMLAGATGIDHALLVVAADDGVMPQTREHLAVVALLGVREATVAITKIDRIDESMREARLAEVRSDIAALLAPTPLAGAPMLAVSATTGEGVDTLRERLLDVASKARAREDDLAFRLAVDRAFTLSGVGTVVTGTVFSGTVRIGDELRVVPGDRSVRVRGIHAQNQKAESAHAGQRCALALAGVTKDEMHRGDWVCAPAIALATDRIDVLLTLWPDEAKPLRSGTTVHAHLGASDVMASLALLDRDALAPGETALAQLVTKESVGAWHGDRGVLRDASATRTMAGVRVLDPFAPVRYRRLPERLRTLAGWAIDDRAARVAALLHNAPLGIDTARLARALSLPDEAALPLPADAVRIEHTAIAQRHLDALDAQITGRLADFHHDAPDEVGPDARRLRRLAAPRTDDALWRHALDALVARGALVRSGTWLHLPDHAARLGEAEQKLAQKLLPRLADGGFDPPWVRDLAKDCSASEPMVRQTLASLARRGEAFQVVKDLYYPLATIERLAAIARDCLDGPEGLQAASFRDATGLGRKRAIQLLEFFDRVGLTRRVKDAHLLRPDTSLFGARP*