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scnpilot_expt_750_bf_scaffold_132_1

Organism: SCNPILOT_EXPT_750_BF_Variovorax_67_130

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 1..522

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CCP6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 170.0
  • Bit_score: 266
  • Evalue 2.20e-68
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL68964.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 170.0
  • Bit_score: 267
  • Evalue 1.40e-68
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 161.0
  • Bit_score: 166
  • Evalue 8.50e-39

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGTCGCCGCGCGAGATGGCGCAGCTGGCGGTCGACGACATCGTGCTCGGCATGCTGAAGACGCGCGGCATCGCGCCGGCCCGGCTGCAGATCGAGATCACCGAAGAGGTCGCGCTCGACACCCACGCAACGCGCAGCCGCCTCAGCGCGCTGTCGGCGGCGGGCGTGACGATCGTGGTGGACGACTTCGGCGTGGGCTATTCGTCGCTGGCTTCGCTGCGCAGCGAATACGTGCGGCAGGTCAAGATCGACCGCAGCTTCATCCTGGGGCTGGCGGCATCGCCTGGCAACGTGGTGCTGGTCGATTCCATCGTGCAACTCGGCCGCTCGCTGAACATCCAGGTCGTGGCCGAAGGCGTGGAAACGCAGGAAGAACTCGACGTCCTGCGCACGCTGGGCTGCACGCTGGTGCAGGGCTACCACCTGGCACGGCCGGCGCCCCTGCCCGACATGACGGCATGGGCCGAGGCCCGGGCCAGGTCGGCCGCGATCATTTCGGCATCGGGCGCGAGCCCGGCCTGA
PROTEIN sequence
Length: 174
VSPREMAQLAVDDIVLGMLKTRGIAPARLQIEITEEVALDTHATRSRLSALSAAGVTIVVDDFGVGYSSLASLRSEYVRQVKIDRSFILGLAASPGNVVLVDSIVQLGRSLNIQVVAEGVETQEELDVLRTLGCTLVQGYHLARPAPLPDMTAWAEARARSAAIISASGASPA*